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ORCIDAnton I. Korobeynikov
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2020 – today
- 2021
[j13]Dmitry Meleshko, Iman Hajirasouliha, Anton I. Korobeynikov
:
coronaSPAdes: from biosynthetic gene clusters to RNA viral assemblies. Bioinform. 38(1): 1-8 (2021)- 2020
- [j12]Yulia Kondratenko, Anton I. Korobeynikov, Alla L. Lapidus:
Correction to: CDSnake: Snakemake pipeline for retrieval of annotated OTUs from paired-end reads using CD-HIT utilities. BMC Bioinform. 21(1): 362 (2020) - [j11]Yulia Kondratenko, Anton I. Korobeynikov, Alla L. Lapidus:
CDSnake: Snakemake pipeline for retrieval of annotated OTUs from paired-end reads using CD-HIT utilities. BMC Bioinform. 21-S(12): 303 (2020) - [j10]Tatiana Dvorkina, Dmitry Antipov, Anton I. Korobeynikov, Sergey Nurk:
SPAligner: alignment of long diverged molecular sequences to assembly graphs. BMC Bioinform. 21-S(12): 306 (2020) - [j9]Alex L. Mitchell, Alexandre Almeida, Martin Beracochea, Miguel A. Boland, Josephine Burgin, Guy Cochrane, Michael R. Crusoe, Varsha Kale, Simon C. Potter, Lorna J. Richardson, Ekaterina A. Sakharova, Maxim Scheremetjew, Anton I. Korobeynikov, Alexander Shlemov, Olga Kunyavskaya, Alla L. Lapidus, Robert D. Finn:
MGnify: the microbiome analysis resource in 2020. Nucleic Acids Res. 48(Database-Issue): D570-D578 (2020)
2010 – 2019
- 2019
- [j8]Vasily Ershov, Artem Tarasov, Alla L. Lapidus, Anton I. Korobeynikov:
IonHammer: Homopolymer-Space Hamming Clustering for IonTorrent Read Error Correction. J. Comput. Biol. 26(2): 124-127 (2019) - [c4]Alexander Shlemov, Anton I. Korobeynikov:
PathRacer: Racing Profile HMM Paths on Assembly Graph. AlCoB 2019: 80-94 - [r1]Andrey D. Prjibelski, Anton I. Korobeynikov, Alla L. Lapidus:
Sequence Analysis. Encyclopedia of Bioinformatics and Computational Biology (3) 2019: 292-322 - 2017
- [c3]Anastasiia Abramova, Anton I. Korobeynikov:
Assessing the Significance of Peptide Spectrum Match Scores. WABI 2017: 14:1-14:11 - 2016
- [j7]Dmitry Antipov, Anton I. Korobeynikov, Jeffrey S. McLean, Pavel A. Pevzner:
hybridSPAdes: an algorithm for hybrid assembly of short and long reads. Bioinform. 32(7): 1009-1015 (2016) - [c2]Sergey Nurk, Dmitry Meleshko, Anton I. Korobeynikov, Pavel A. Pevzner:
metaSPAdes: A New Versatile de novo Metagenomics Assembler. RECOMB 2016: 258 - 2015
- [j6]Irina Vasilinetc, Andrey D. Prjibelski, Alexey A. Gurevich, Anton I. Korobeynikov, Pavel A. Pevzner:
Assembling short reads from jumping libraries with large insert sizes. Bioinform. 31(20): 3262-3268 (2015) - 2014
- [j5]Andrey D. Prjibelski, Irina Vasilinetc, Anton Bankevich, Alexey A. Gurevich, Tatiana Krivosheeva, Sergey Nurk, Son K. Pham, Anton I. Korobeynikov, Alla L. Lapidus, Pavel A. Pevzner:
ExSPAnder: a universal repeat resolver for DNA fragment assembly. Bioinform. 30(12): 293-301 (2014) - [j4]Nina Golyandina, Anton I. Korobeynikov:
Basic Singular Spectrum Analysis and forecasting with R. Comput. Stat. Data Anal. 71: 934-954 (2014) - 2013
- [j3]Sergey I. Nikolenko, Anton I. Korobeynikov, Max A. Alekseyev:
BayesHammer: Bayesian clustering for error correction in single-cell sequencing. BMC Genom. 14(S-1): S7 (2013) - [j2]Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Scott R. Clingenpeel, Tanja Woyke, Jeffrey S. McLean, Roger Lasken, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner:
Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products. J. Comput. Biol. 20(10): 714-737 (2013) - [c1]Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelsky, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Jeffrey S. McLean, Roger Lasken, Scott R. Clingenpeel, Tanja Woyke, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner:
Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads. RECOMB 2013: 158-170 - 2012
- [j1]Anton I. Korobeynikov:
Consistency of Parametric MLE Under Mixed Case Interval Censoring. Commun. Stat. Simul. Comput. 41(7): 1083-1092 (2012) - [i2]Sergey I. Nikolenko, Anton I. Korobeynikov, Max A. Alekseyev:
BayesHammer: Bayesian clustering for error correction in single-cell sequencing. CoRR abs/1211.2756 (2012)
2000 – 2009
- 2009
- [i1]Anton I. Korobeynikov:
Computation- and Space-Efficient Implementation of SSA. CoRR abs/0911.4498 (2009)
Coauthor Index
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