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2010 – 2019
- 2011
[j9]Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin Ehler
, Vinodh N. Rajapakse, Robert F. Bonner, Jacob D. Brown, Brian P. Brooks, Vladimir L. Larionov, William C. Reinhold, John N. Weinstein, Yves Pommier:
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis. BMC Bioinform. 12: 52 (2011)- 2010
- [j8]Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein:
Ontogenomic study of the relationship between number of gene splice variants and GO categorization. Bioinform. 26(16): 1945-1949 (2010) - [c4]Martin Ehler, Vinodh N. Rajapakse, Barry Zeeberg, Brian P. Brooks, Jacob D. Brown, Wojciech Czaja, Robert F. Bonner:
Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model. ISBRA 2010: 38-49
2000 – 2009
- 2008
- [j7]Hans A. Kestler, André Müller, Johann M. Kraus, Malte Buchholz, Thomas M. Gress, Hongfang Liu, David W. Kane, Barry Zeeberg, John N. Weinstein:
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays. BMC Bioinform. 9 (2008) - [j6]Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen, James A. Cleland, Ari B. Kahn, Hongfang Liu, John N. Weinstein:
SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies. BMC Bioinform. 9 (2008) - 2007
- [j5]Hongfang Liu, Barry Zeeberg, Gang Qu, Akif Günes Koru, Alessandro Ferrucci, Ari B. Kahn, Michael C. Ryan, Antej Nuhanovic, Peter J. Munson, William C. Reinhold, David W. Kane, John N. Weinstein:
AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. Bioinform. 23(18): 2385-2390 (2007) - [j4]Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry Zeeberg, D. Curtis Jamison, John N. Weinstein:
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis. BMC Bioinform. 8 (2007) - 2005
- [j3]Barry Zeeberg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine, Hong Cao, David W. Kane, Mark Reimers, Robert M. Stephens, David Bryant, Stanley K. Burt, Eldad Elnekave, Danielle M. Hari, Thomas A. Wynn, Charlotte Cunningham-Rundles, Donn M. Stewart, David Nelson, John N. Weinstein:
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID). BMC Bioinform. 6: 168 (2005) - 2004
- [j2]Barry Zeeberg, Joseph Riss, David W. Kane, Kimberly J. Bussey, Edward Uchio, W. Marston Linehan, J. Carl Barrett, John N. Weinstein:
Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics. BMC Bioinform. 5: 80 (2004) - 2003
- [c3]Weimin Feng, Geoffrey Wang, Barry Zeeberg, Kejiao Guo, Anthony T. Fojo, David W. Kane, William C. Reinhold, Samir Lababidi, John N. Weinstein, May D. Wang:
Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data. AMIA 2003
1990 – 1999
- 1998
- [c2]Barry Zeeberg, Kevin Watanabe, Susumu Goto, Ross A. Overbeek, Larry Kerschberg, George Michaels:
Metabolic Pathway Interface to Molecular Biology Databases. SSDBM 1998: 238-241 - 1997
- [c1]Lawrence Hunter, Barry Zeeberg:
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage. ISMB 1997: 153-156 - 1995
- [j1]Barry Zeeberg:
Theoretical relationships of receptor and delivery sensitivities and measurable parameters in in vivo neuroreceptor-radioligand interactions. IEEE Trans. Medical Imaging 14(3): 608-615 (1995)
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