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Serena J. Counsell
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2020 – today
- 2022
- [j29]Yassine Taoudi-Benchekroun, Daan Christiaens
, Irina Grigorescu
, Oliver Gale-Grant, Andreas Schuh
, Maximilian Pietsch
, Andrew Chew
, Nicholas Harper
, Shona Falconer
, Tanya Poppe
, Emer J. Hughes, Jana Hutter
, Anthony N. Price
, Jacques-Donald Tournier
, Lucilio Cordero-Grande
, Serena J. Counsell
, Daniel Rueckert
, Tomoki Arichi
, Joseph V. Hajnal, A. David Edwards
, Maria Deprez
, Dafnis Batalle
:
Predicting age and clinical risk from the neonatal connectome. NeuroImage 257: 119319 (2022) - [c16]Alena Uus, Mohammad-Usamah Ayub, Abi Gartner
, Vanessa Kyriakopoulou
, Maximilian Pietsch, Irina Grigorescu, Daan Christiaens, Jana Hutter
, Lucilio Cordero-Grande, Anthony Price, Dafnis Batalle
, Serena J. Counsell
, Joseph V. Hajnal
, A. David Edwards
, Mary A. Rutherford, Maria Deprez
:
Segmentation of Periventricular White Matter in Neonatal Brain MRI: Analysis of Brain Maturation in Term and Preterm Cohorts. PIPPI@MICCAI 2022: 94-104 - 2021
- [j28]Ralica Dimitrova, Maximilian Pietsch, Judit Ciarrusta, Sean P. Fitzgibbon
, Logan Z. J. Williams, Daan Christiaens
, Lucilio Cordero-Grande
, Dafnis Batalle, Antonios Makropoulos, Andreas Schuh, Anthony N. Price, Jana Hutter, Rui Pedro A. G. Teixeira, Emer J. Hughes, Andrew Chew, Shona Falconer, Olivia Carney, Alexia Egloff, Jacques-Donald Tournier, Grainne M. McAlonan, Mary A. Rutherford, Serena J. Counsell
, Emma C. Robinson, Joseph V. Hajnal, Daniel Rueckert, A. David Edwards, Jonathan O'Muircheartaigh:
Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age. NeuroImage 243: 118488 (2021) - [c15]Russell Macleod, Serena J. Counsell
, David W. Carmichael
, Ralica Dimitrova
, Maximilian Pietsch, A. David Edwards
, Mary A. Rutherford, Jonathan O'Muircheartaigh
:
Detection of Injury and Automated Triage of Preterm Neonatal MRI Using Patch-Based Gaussian Processes. UNSURE/PIPPI@MICCAI 2021: 231-241 - 2020
- [j27]Maria Deprez
, Anthony Price
, Daan Christiaens
, Georgia Lockwood Estrin
, Lucilio Cordero-Grande
, Jana Hutter
, Alessandro Daducci
, Jacques-Donald Tournier
, Mary A. Rutherford
, Serena J. Counsell
, Meritxell Bach Cuadra
, Joseph V. Hajnal
:
Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. IEEE Trans. Medical Imaging 39(4): 1104-1113 (2020) - [c14]Russell Macleod, Jonathan O'Muircheartaigh, A. David Edwards
, David W. Carmichael
, Mary A. Rutherford, Serena J. Counsell
:
Automatic Detection of Neonatal Brain Injury on MRI. ASMUS/PIPPI@MICCAI 2020: 324-333
2010 – 2019
- 2019
- [j26]Dafnis Batalle
, Jonathan O'Muircheartaigh
, Antonios Makropoulos, Christopher J. Kelly
, Ralica Dimitrova
, Emer J. Hughes, Joseph V. Hajnal
, Hui Zhang
, Daniel C. Alexander
, A. David Edwards
, Serena J. Counsell
:
Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo. NeuroImage 185: 764-775 (2019) - [j25]Maximilian Pietsch, Daan Christiaens
, Jana Hutter
, Lucilio Cordero-Grande
, Anthony N. Price, Emer J. Hughes, A. David Edwards
, Joseph V. Hajnal
, Serena J. Counsell
, Jacques-Donald Tournier:
A framework for multi-component analysis of diffusion MRI data over the neonatal period. NeuroImage 186: 321-337 (2019) - 2018
- [j24]Antonios Makropoulos, Serena J. Counsell
, Daniel Rueckert:
A review on automatic fetal and neonatal brain MRI segmentation. NeuroImage 170: 231-248 (2018) - [j23]Antonios Makropoulos, Emma C. Robinson
, Andreas Schuh
, Robert Wright, Sean P. Fitzgibbon
, Jelena Bozek
, Serena J. Counsell
, Johannes K. Steinweg
, Katy Vecchiato, Jonathan Passerat-Palmbach
, Gregor Lenz, Filippo Mortari, Tencho Tenev, Eugene P. Duff, Matteo Bastiani
, Lucilio Cordero-Grande
, Emer J. Hughes, Nora Tusor, Daniel Rueckert:
The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. NeuroImage 173: 88-112 (2018) - 2017
- [j22]Dafnis Batalle
, Emer J. Hughes, Hui Zhang
, Jacques-Donald Tournier, Nora Tusor
, Paul Aljabar, Luqman Wali, Daniel C. Alexander
, Joseph V. Hajnal
, Chiara Nosarti
, A. David Edwards
, Serena J. Counsell
:
Early development of structural networks and the impact of prematurity on brain connectivity. NeuroImage 149: 379-392 (2017) - [j21]Diliana Pecheva
, Paul A. Yushkevich
, Dafnis Batalle
, Emer J. Hughes, Paul Aljabar, Julia Wurie, Joseph V. Hajnal
, A. David Edwards
, Daniel C. Alexander
, Serena J. Counsell
, Hui Zhang
:
A tract-specific approach to assessing white matter in preterm infants. NeuroImage 157: 675-694 (2017) - [j20]Kristin Keunen, Serena J. Counsell
, Manon J. N. L. Benders:
The emergence of functional architecture during early brain development. NeuroImage 160: 2-14 (2017) - 2016
- [j19]Gareth Ball
, Paul Aljabar, Tomoki Arichi
, Nora Tusor
, D. Cox, Nazakat Merchant
, P. Nongena
, Joseph V. Hajnal
, A. David Edwards
, Serena J. Counsell
:
Machine-learning to characterise neonatal functional connectivity in the preterm brain. NeuroImage 124: 267-275 (2016) - [j18]Antonios Makropoulos, Paul Aljabar, Robert Wright, Britta Hüning, Nazakat Merchant
, Tomoki Arichi
, Nora Tusor
, Joseph V. Hajnal
, A. David Edwards
, Serena J. Counsell
, Daniel Rueckert:
Regional growth and atlasing of the developing human brain. NeuroImage 125: 456-478 (2016) - 2015
- [j17]Ivana Isgum
, Manon J. N. L. Benders, Brian B. Avants
, Manuel Jorge Cardoso
, Serena J. Counsell
, Elda Fischi Gomez
, Laura Gui, Petra S. Hüppi
, Karina J. Kersbergen, Antonios Makropoulos, Andrew Melbourne
, Pim Moeskops
, Christian P. Mol, Maria Kuklisova-Murgasova
, Daniel Rueckert, Julia A. Schnabel
, Vedran Srhoj-Egekher
, Jue Wu, Siying Wang, Linda S. de Vries, Max A. Viergever:
Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. Medical Image Anal. 20(1): 135-151 (2015) - [c13]Veronika A. M. Zimmer
, Ben Glocker
, Paul Aljabar, Serena J. Counsell
, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Miguel Ángel González Ballester, Daniel Rueckert, Gemma Piella
:
Learning and Combining Image Similarities for Neonatal Brain Population Studies. MLMI 2015: 110-117 - 2014
- [j16]Antonios Makropoulos, Ioannis S. Gousias, Christian Ledig
, Paul Aljabar, Ahmed Serag
, Joseph V. Hajnal
, A. David Edwards
, Serena J. Counsell
, Daniel Rueckert
:
Automatic Whole Brain MRI Segmentation of the Developing Neonatal Brain. IEEE Trans. Medical Imaging 33(9): 1818-1831 (2014) - [c12]Andreas Schuh
, Maria Murgasova
, Antonios Makropoulos, Christian Ledig
, Serena J. Counsell
, Joseph V. Hajnal
, Paul Aljabar, Daniel Rueckert:
Construction of a 4D Brain Atlas and Growth Model Using Diffeomorphic Registration. STIA 2014: 27-37 - 2013
- [c11]Markus Schirmer
, Gareth Ball, Serena J. Counsell
, A. David Edwards
, Daniel Rueckert
, Joseph V. Hajnal
, Paul Aljabar:
Normalisation of Neonatal Brain Network Measures Using Stochastic Approaches. MICCAI (1) 2013: 574-581 - 2012
- [j15]Ahmed Serag
, Paul Aljabar, Gareth Ball
, Serena J. Counsell
, James P. Boardman
, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Daniel Rueckert
:
Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. NeuroImage 59(3): 2255-2265 (2012) - [j14]Ioannis S. Gousias, A. David Edwards
, Mary A. Rutherford
, Serena J. Counsell
, Joseph V. Hajnal
, Daniel Rueckert
, Alexander Hammers
:
Magnetic resonance imaging of the newborn brain: Manual segmentation of labelled atlases in term-born and preterm infants. NeuroImage 62(3): 1499-1509 (2012) - [j13]Tomoki Arichi
, Gianlorenzo Fagiolo, Marta Varela
, Alejandro Melendez-Calderon
, Alessandro Allievi, Nazakat Merchant
, Nora Tusor
, Serena J. Counsell
, Etienne Burdet
, Christian F. Beckmann
, A. David Edwards
:
Development of BOLD signal hemodynamic responses in the human brain. NeuroImage 63(2): 663-673 (2012) - [j12]Ahmed Serag
, Paul Aljabar, Gareth Ball, Serena J. Counsell
, James P. Boardman
, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Daniel Rueckert
:
Erratum to Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression [NeuroImage 59/3(2012) 2255-2265]. NeuroImage 63(2): 998 (2012) - [j11]Emer J. Hughes, Jacqueline Bond, Patricia Svrckova, Antonios Makropoulos, Gareth Ball
, David J. Sharp
, A. David Edwards
, Joseph V. Hajnal
, Serena J. Counsell
:
Regional changes in thalamic shape and volume with increasing age. NeuroImage 63(3): 1134-1142 (2012) - [c10]Ahmed Serag
, Paul Aljabar, Serena J. Counsell, James P. Boardman
, Joseph V. Hajnal, Daniel Rueckert
:
LISA: Longitudinal image registration via spatio-temporal atlases. ISBI 2012: 334-337 - [c9]Ahmed Serag
, Ioannis S. Gousias, Antonios Makropoulos, Paul Aljabar, Joseph V. Hajnal, James P. Boardman
, Serena J. Counsell, Daniel Rueckert
:
Unsupervised Learning of Shape Complexity: Application to Brain Development. STIA 2012: 88-99 - 2011
- [j10]Maria Kuklisova-Murgasova
, Paul Aljabar, Latha Srinivasan, Serena J. Counsell
, Valentina Doria, Ahmed Serag
, Ioannis S. Gousias, James P. Boardman
, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Daniel Rueckert
:
A dynamic 4D probabilistic atlas of the developing brain. NeuroImage 54(4): 2750-2763 (2011) - [j9]Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell
, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Daniel Rueckert
:
A Combined Manifold Learning Analysis of Shape and Appearance to Characterize Neonatal Brain Development. IEEE Trans. Medical Imaging 30(12): 2072-2086 (2011) - [c8]Ahmed Serag
, Paul Aljabar, Serena J. Counsell, James P. Boardman
, Joseph V. Hajnal, Daniel Rueckert
:
Tracking developmental changes in subcortical structures of the preterm brain using multi-modal MRI. ISBI 2011: 349-352 - [c7]Ahmed Serag
, Paul Aljabar, Serena J. Counsell, James P. Boardman
, Joseph V. Hajnal, Daniel Rueckert
:
Construction of a 4D atlas of the developing brain using non-rigid registration. ISBI 2011: 1532-1535 - [c6]Ahmed Serag, Paul Aljabar, Serena J. Counsell, James P. Boardman, Joseph V. Hajnal, Daniel Rueckert:
A Four-dimensional Atlas of Neonatal Brain MRI. MIUA 2011: 201-206 - 2010
- [j8]Tomoki Arichi
, A. Moraux, A. Melendez, Valentina Doria, M. Groppo, Nazakat Merchant
, S. Combs, Etienne Burdet
, David J. Larkman, Serena J. Counsell
, Christian F. Beckmann
, A. David Edwards
:
Somatosensory cortical activation identified by functional MRI in preterm and term infants. NeuroImage 49(3): 2063-2071 (2010) - [j7]James P. Boardman
, C. Craven, S. Valappil, Serena J. Counsell
, Leigh Dyet, Daniel Rueckert
, Paul Aljabar, Mary A. Rutherford
, A. T. M. Chew, Joanna M. Allsop, Frances M. Cowan, A. David Edwards
:
A common neonatal image phenotype predicts adverse neurodevelopmental outcome in children born preterm. NeuroImage 52(2): 409-414 (2010) - [j6]Gareth Ball
, Serena J. Counsell
, Mustafa Anjari, Nazakat Merchant
, Tomoki Arichi
, Valentina Doria, Mary A. Rutherford
, A. David Edwards
, Daniel Rueckert
, James P. Boardman
:
An optimised tract-based spatial statistics protocol for neonates: Applications to prematurity and chronic lung disease. NeuroImage 53(1): 94-102 (2010) - [c5]Paul Aljabar, Robin Wolz, Latha Srinivasan, Serena J. Counsell
, James P. Boardman
, Maria Murgasova
, Valentina Doria, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
:
Combining Morphological Information in a Manifold Learning Framework: Application to Neonatal MRI. MICCAI (3) 2010: 1-8
2000 – 2009
- 2007
- [j5]Carlos E. Thomaz
, James P. Boardman
, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
:
A multivariate statistical analysis of the developing human brain in preterm infants. Image Vis. Comput. 25(6): 981-994 (2007) - [j4]Serena J. Counsell
, Leigh Dyet, David J. Larkman, Rita Gouveia Nunes
, James P. Boardman
, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal
, Mary A. Rutherford
, A. David Edwards
:
Thalamo-cortical connectivity in children born preterm mapped using probabilistic magnetic resonance tractography. NeuroImage 34(3): 896-904 (2007) - [j3]Mustafa Anjari, Latha Srinivasan, Joanna M. Allsop, Joseph V. Hajnal
, Mary A. Rutherford
, A. David Edwards
, Serena J. Counsell
:
Diffusion tensor imaging with tract-based spatial statistics reveals local white matter abnormalities in preterm infants. NeuroImage 35(3): 1021-1027 (2007) - [c4]Shuzhou Jiang, Hui Xue, Serena J. Counsell
, Mustafa Anjari, Joanna M. Allsop, Mary A. Rutherford, Daniel Rueckert, Joseph V. Hajnal:
In-utero Three Dimension High Resolution Fetal Brain Diffusion Tensor Imaging. MICCAI (1) 2007: 18-26 - [c3]Kanwal K. Bhatia, Paul Aljabar, James P. Boardman
, Latha Srinivasan, Maria Murgasova
, Serena J. Counsell
, Mary A. Rutherford
, Joseph V. Hajnal
, A. David Edwards
, Daniel Rueckert:
Groupwise Combined Segmentation and Registration for Atlas Construction. MICCAI (1) 2007: 532-540 - 2006
- [j2]James P. Boardman
, Serena J. Counsell
, Daniel Rueckert
, Olga Kapellou, Kanwal K. Bhatia, Paul Aljabar, Joseph V. Hajnal
, Joanna M. Allsop, Mary A. Rutherford
, A. David Edwards
:
Abnormal deep grey matter development following preterm birth detected using deformation-based morphometry. NeuroImage 32(1): 70-78 (2006) - [j1]Christina Malamateniou, Serena J. Counsell
, Joanna M. Allsop, Julie Fitzpatrick, Latha Srinivasan, Frances M. Cowan, Joseph V. Hajnal
, Mary A. Rutherford
:
The effect of preterm birth on neonatal cerebral vasculature studied with magnetic resonance angiography at 3 Tesla. NeuroImage 32(3): 1050-1059 (2006) - [c2]Carlos E. Thomaz
, James P. Boardman
, Serena J. Counsell, Derek L. G. Hill, Joseph V. Hajnal, A. David Edwards, Mary A. Rutherford, Duncan Fyfe Gillies, Daniel Rueckert
:
A whole brain morphometric analysis of changes associated with pre-term birth. Medical Imaging: Image Processing 2006: 61445Y - 2003
- [c1]James P. Boardman, Kanwal K. Bhatia, Serena J. Counsell
, Joanna M. Allsop, Olga Kapellou, Mary A. Rutherford
, A. David Edwards
, Joseph V. Hajnal
, Daniel Rueckert:
An Evaluation of Deformation-Based Morphometry Applied to the Developing Human Brain and Detection of Volumetric Changes Associated with Preterm Birth. MICCAI (1) 2003: 697-704
Coauthor Index
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