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BSB 2007: Angra dos Reis, Brazil

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Marie-France Sagot, Maria Emília Telles Walter:
Advances in Bioinformatics and Computational Biology, Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007, Proceedings. Lecture Notes in Computer Science 4643, Springer 2007, ISBN 978-3-540-73730-8

Selected Articles

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  - conf/wob/MachadoSRS07
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Karina S. Machado, Evelyn K. Schroeder, Duncan D. Ruiz, Osmar Norberto de Souza:
Automating Molecular Docking with Explicit Receptor Flexibility Using Scientific Workflows. 1-11
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  - conf/wob/BayaLGGT07
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Ariel E. Bayá, Mónica G. Larese, Pablo M. Granitto, Juan Carlos Gomez, Elizabeth Tapia:
Gene Set Enrichment Analysis Using Non-parametric Scores. 12-21
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  - conf/wob/Martinez-ArellanoB07
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Giovanna Martínez-Arellano, Carlos A. Brizuela:
Comparison of Simple Encoding Schemes in GA's for the Motif Finding Problem: Preliminary Results. 22-33
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  - conf/wob/FaceliCS07
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Katti Faceli, André Carlos Ponce de Leon Ferreira de Carvalho, Marcílio Carlos Pereira de Souto:
Multi-Objective Clustering Ensemble with Prior Knowledge. 34-45
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Marcelo Nardelli Pinto Santana, Alba Cristina Magalhaes Alves de Melo:
Biological Sequence Comparison Application in Heterogeneous Environments with Dynamic Programming Algorithms. 46-56
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Christian Baudet, Zanoni Dias:
New EST Trimming Procedure Applied to SUCEST Sequences. 57-68
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Daniel A. S. Anjos, Gustavo G. Zerlotini, Guilherme A. Pinto, Maria Emília Telles Walter, Marcelo M. Brigido, Guilherme P. Telles, Carlos Juliano M. Viana, Nalvo F. Almeida:
A Method for Inferring Biological Functions Using Homologous Genes Among Three Genomes. 69-80
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Ivan G. Costa, Marcílio Carlos Pereira de Souto, Alexander Schliep:
Validating Gene Clusterings by Selecting Informative Gene Ontology Terms with Mutual Information. 81-92
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Gábor Iván:
An Optimized Distance Function for Comparison of Protein Binding Sites. 93-100
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Guillaume Blin, Guillaume Fertin, Gaël Herry, Stéphane Vialette:
Comparing RNA Structures: Towards an Intermediate Model Between the Editand the LapcsProblems. 101-112
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Guilherme Palermo Coelho, Ana Estela Antunes da Silva, Fernando J. Von Zuben:
Evolving Phylogenetic Trees: A Multiobjective Approach. 113-125
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Eduardo P. Costa, Ana Carolina Lorena, André Carlos Ponce de Leon Ferreira de Carvalho, Alex Alves Freitas, Nicholas Holden:
Comparing Several Approaches for Hierarchical Classification of Proteins with Decision Trees. 126-137
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Cristiane Neri Nobre, José Miguel Ortega, Antônio de Pádua Braga:
High Efficiency on Prediction of Translation Initiation Site (TIS) of RefSeq Sequences. 138-148

Extended Abstracts

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Roberto T. Arrial, Roberto C. Togawa, Marcelo M. Brigido:
Outlining a Strategy for Screening Non-coding RNAs on a Transcriptome Through Support Vector Machines. 149-152
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Nalvo F. Almeida, André C. Lima, Said Sadique Adi, Carlos Juliano M. Viana, Marcel Y. Nakazaki, Andrey A. Tamura, Luciana Y. Hiratsuka, Leandro P. Brazil:
Mapping Contigs onto Reference Genomes. 153-157
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Priscila V. S. Z. Capriles, Laurent Emmanuel Dardenne:
Molecular Dynamics Simulations of Cruzipains 1 and 2 at Different Temperatures. 158-162
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Fábio L. Custódio, Helio J. C. Barbosa, Laurent Emmanuel Dardenne:
Genetic Algorithm for Finding Multiple Low Energy Conformations of Poly Alanine Sequences Under an Atomistic Protein Model. 163-166
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Stefan Günther, Stefanie Neumann, Jessica Ahmed, Robert Preissner:
Cellular Fingerprints: A Novel Concept for the Integration of Experimental Data and Compound-Target-Pathway Relations (Extended Abstract). 167-170
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Magnólia A. Campos, Flávia B. Silva, Marilia S. Silva, Érika E. V. S. Albuquerque, Alexandre M. do Amaral, Cristiane C. Teixeira, Ângela Mehta, Maria Fátima G. Sá:
Identification of the Putative Class 3 R Genes in Coffea arabica from CafEST Database. 171-175

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