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Journal of the American Medical Informatics Association, Volume 18
Volume 18, Number 1, January 2011
- Lucila Ohno-Machado:
What's new in informatics. 1
- Lucila Ohno-Machado:
A new JAMIA. 2
- Bradley A. Malin, Kathleen Benitez, Daniel R. Masys:
Never too old for anonymity: a statistical standard for demographic data sharing via the HIPAA Privacy Rule. 3-10 - Joaquin A. Blaya, Sonya S. Shin, Carmen Contreras, Gloria Yale, Carmen Suares, Luis Asencios, Jihoon Kim, Pablo Rodriguez, Peter Cegielski, Hamish S. F. Fraser:
Full impact of laboratory information system requires direct use by clinical staff: cluster randomized controlled trial. 11-16 - Jennifer S. Myers, Sattar Gojraty, Wei Yang, Amy Linsky, Subha Airan-Javia, Rosemary C. Polomano:
A randomized-controlled trial of computerized alerts to reduce unapproved medication abbreviation use. 17-23 - Nancy L. Atkinson, Holly A. Massett, Christy Mylks, Lauren A. McCormack, Julia Kish-Doto, Bradford W. Hesse, Min Qi Wang:
Assessing the impact of user-centered research on a clinical trial eHealth tool via counterbalanced research design. 24-31 - Kim R. Saverno, Lisa E. Hines, Terri L. Warholak, Amy J. Grizzle, Lauren Babits, Courtney Clark, Ann M. Taylor, Daniel C. Malone:
Ability of pharmacy clinical decision-support software to alert users about clinically important drug-drug interactions. 32-37 - Alexander G. Fiks, Evaline A. Alessandrini, Christopher B. Forrest, Saira Khan, A. Russell Localio, Andreas Gerber:
Electronic medical record use in pediatric primary care. 38-44 - Sarah A. Collins, Suzanne Bakken, David K. Vawdrey, Enrico W. Coiera, Leanne M. Currie:
Agreement between common goals discussed and documented in the ICU. 45-50 - Calvin K. L. Or, Ben-Tzion Karsh, Dolores J. Severtson, Laura J. Burke, Roger L. Brown, Patricia Flatley Brennan:
Factors affecting home care patients' acceptance of a web-based interactive self-management technology. 51-59 - Ana Lucia Hincapie, Terri L. Warholak, Anita C. Murcko, Marion Slack, Daniel C. Malone:
Physicians' opinions of a health information exchange. 60-65
- Maria Hägglund, Rong Chen, Sabine Koch:
Modeling shared care plans using CONTsys and openEHR to support shared homecare of the elderly. 66-69 - Joshua E. Richardson, Sina Shah-Hosseini, John E. Fiadjoe, Joan S. Ash, Mohamed A. Rehman:
The effects of a hands-free communication device system in a surgical suite. 70-72
- Warner V. Slack, Hollis B. Kowaloff, Roger B. Davis, Tom Delbanco, Steven E. Locke, Howard L. Bleich:
Test-retest reliability in a computer-based medical history. 73-76
- Kenneth W. Goodman, Eta S. Berner, Mark A. Dente, Bonnie Kaplan, Ross Koppel, Donald W. Rucker, Daniel Z. Sands, Peter Winkelstein:
Challenges in ethics, safety, best practices, and oversight regarding HIT vendors, their customers, and patients: a report of an AMIA special task force. 77-81 - Meryl Bloomrosen, Justin Starren, Nancy M. Lorenzi, Joan S. Ash, Vimla L. Patel, Edward H. Shortliffe:
Anticipating and addressing the unintended consequences of health IT and policy: a report from the AMIA 2009 Health Policy Meeting. 82-90 - Thomas H. Payne, Don E. Detmer, Jeremy C. Wyatt, Iain E. Buchan:
National-scale clinical information exchange in the United Kingdom: lessons for the United States. 91-98 - Robert H. Dolin, Liora Alschuler:
Approaching semantic interoperability in Health Level Seven. 99-103
- Aaron M. Cohen:
Letter: Performance of support-vector-machine-based classification on 15 systematic review topics evaluated with the WSS@95 measure. 104 - Stan Matwin, Alexandre Kouznetsov, Diana Inkpen, Oana Frunza, Peter O'Blenis:
Letter: Performance of SVM and Bayesian classifiers on the systematic review classification task. 104-105
- Edward H. Shortliffe:
AMIA president's message. 107
Volume 18, Number 2, March 2011
- Lucila Ohno-Machado:
Electronic health records and computer-based clinical decision support: are we there yet? 109
- Harold P. Lehmann, Lucila Ohno-Machado:
Evaluation of informatics systems: beyond RCTs and beyond the hospital. 110-111
- George Hripcsak, David K. Vawdrey, Matthew R. Fred, Susan B. Bostwick:
Use of electronic clinical documentation: time spent and team interactions. 112-117 - Nhan V. Do, Rick Barnhill, Kimberly A. Heermann-Do, Keith L. Salzman, Ronald W. Gimbel:
The military health system's personal health record pilot with Microsoft HealthVault and Google Health. 118-124 - Tracy Ann Sykes, Viswanath Venkatesh, Arun Rai:
Explaining physicians' use of EMR systems and performance in the shakedown phase. 125-130 - Jose F. Florez-Arango, M. Sriram Iyengar, Kim Dunn, Jiajie Zhang:
Performance factors of mobile rich media job aids for community health workers. 131-137 - Christopher Pearce, Michael Victor Arnold, Christine Phillips, Stephen Trumble, Kathryn Dwan:
The patient and the computer in the primary care consultation. 138-142 - Joshua R. Vest, Hongwei Zhao, Jon Jasperson, Larry D. Gamm, Robert L. Ohsfeldt:
Factors motivating and affecting health information exchange usage. 143-149 - Martin Chieng Were, Changyu Shen, William M. Tierney, Joseph J. Mamlin, Paul G. Biondich, Xiaochun Li, Sylvester N. Kimaiyo, Burke W. Mamlin:
Evaluation of computer-generated reminders to improve CD4 laboratory monitoring in sub-Saharan Africa: a prospective comparative study. 150-155
- Omer Aziz, Louis Atallah, Benny P. L. Lo, Edward Gray, Thanos Athanasiou, Ara Darzi, Guang-Zhong Yang:
Ear-worn body sensor network device: an objective tool for functional postoperative home recovery monitoring. 156-159 - Robert E. El-Kareh, Tejal K. Gandhi, Eric G. Poon, Lisa P. Newmark, Jonathan Ungar, E. John Orav, Thomas D. Sequist:
Actionable reminders did not improve performance over passive reminders for overdue tests in the primary care setting. 160-163 - Kevin Haynes, Darren R. Linkin, Neil O. Fishman, Warren B. Bilker, Brian L. Strom, Eric A. Pifer, Sean Hennessy:
Effectiveness of an information technology intervention to improve prophylactic antibacterial use in the postoperative period. 164-168
- Jonathan A. Zlabek, Jared W. Wickus, Michelle A. Mathiason:
Early cost and safety benefits of an inpatient electronic health record. 169-172
- Joseph L. Y. Liu, Jeremy C. Wyatt:
The case for randomized controlled trials to assess the impact of clinical information systems. 173-180 - S. Trent Rosenbloom, Joshua C. Denny, Hua Xu, Nancy M. Lorenzi, William W. Stead, Kevin B. Johnson:
Data from clinical notes: a perspective on the tension between structure and flexible documentation. 181-186 - Adam Wright, Dean F. Sittig, Joan S. Ash, David W. Bates, Joshua Feblowitz, Greg Fraser, Saverio M. Maviglia, Carmit McMullen, W. Paul Nichol, Justine E. Pang, Jack Starmer, Blackford Middleton:
Governance for clinical decision support: case studies and recommended practices from leading institutions. 187-194 - Julia Kampov-Polevoi, Bradley M. Hemminger:
A curricula-based comparison of biomedical and health informatics programs in the USA. 195-202
- Nancy M. Lorenzi:
AMIA's realigned strategic plan. 203-208
Volume 18, Number 3, May 2011
- Lucila Ohno-Machado:
Informatics is about algorithms, systems, people, and social networks. 209
- Lucila Ohno-Machado:
A hybrid open-access model to bridge the publishing divide and reach out to a broader community. 210-211
- Khaled El Emam, Jun Hu, Jay Mercer, Liam Peyton, Murat Kantarcioglu, Bradley A. Malin, David L. Buckeridge, Saeed Samet, Craig Earle:
A secure protocol for protecting the identity of providers when disclosing data for disease surveillance. 212-217 - Jialan Que, Fu-Chiang Tsui:
Rank-based spatial clustering: an algorithm for rapid outbreak detection. 218-224 - Christopher A. Naun, Cody S. Olsen, J. Michael Dean, Lenora M. Olson, Lawrence J. Cook, Heather T. Keenan:
Can poison control data be used for pharmaceutical poisoning surveillance? 225-231 - Adam Wright, Dean F. Sittig, Joan S. Ash, Joshua Feblowitz, Seth Meltzer, Carmit McMullen, Ken P. Guappone, Jim Carpenter, Joshua E. Richardson, Linas Simonaitis, R. Scott Evans, W. Paul Nichol, Blackford Middleton:
Development and evaluation of a comprehensive clinical decision support taxonomy: comparison of front-end tools in commercial and internally developed electronic health record systems. 232-242 - Laura J. Hoeksema, Alia Bazzy-Asaad, Edwin A. Lomotan, Diana E. Edmonds, Gabriela Ramírez-Garnica, Richard N. Shiffman, Leora I. Horwitz:
Accuracy of a computerized clinical decision-support system for asthma assessment and management. 243-250 - Thomas R. Campion Jr., Addison K. May, Lemuel R. Waitman, Asli Ozdas, Nancy M. Lorenzi, Cynthia S. Gadd:
Characteristics and effects of nurse dosing over-rides on computer-based intensive insulin therapy protocol performance. 251-258 - Adam G. Dunn, Mei-Sing Ong, Johanna I. Westbrook, Farah Magrabi, Enrico W. Coiera, Wayne Wobcke:
A simulation framework for mapping risks in clinical processes: the case of in-patient transfers. 259-266 - Lynn Curry, Martin H. Reed:
Electronic decision support for diagnostic imaging in a primary care setting. 267-270 - Sowmya R. Rao, Catherine M. DesRoches, Karen Donelan, Eric G. Campbell, Paola D. Miralles, Ashish K. Jha:
Electronic health records in small physician practices: availability, use, and perceived benefits. 271-275 - Julie Chan, Kaveh G. Shojania, Anthony C. Easty, Edward E. Etchells:
Does user-centred design affect the efficiency, usability and safety of CPOE order sets? 276-281 - Kai Zheng, Qiaozhu Mei, David A. Hanauer:
Collaborative search in electronic health records. 282-291 - Elissa R. Weitzman, Emily Cole, Liljana Kaci, Kenneth D. Mandl:
Social but safe? Quality and safety of diabetes-related online social networks. 292-297 - Priya Nambisan:
Information seeking and social support in online health communities: impact on patients' perceived empathy. 298-304
- Rebecca Schnall, James J. Cimino, Leanne M. Currie, Suzanne Bakken:
Information needs of case managers caring for persons living with HIV. 305-308 - Jeffrey L. Schnipper, Catherine L. Liang, Claus Hamann, Andrew S. Karson, Matvey B. Palchuk, Patricia C. McCarthy, Melanie Sherlock, Alexander Turchin, David W. Bates:
Development of a tool within the electronic medical record to facilitate medication reconciliation after hospital discharge. 309-313 - Daniele Segagni, Fulvia Ferrazzi, Cristiana Larizza, Valentina Tibollo, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi:
R Engine Cell: integrating R into the i2b2 software infrastructure. 314-317
- Urmimala Sarkar, Andrew J. Karter, Jennifer Y. Liu, Nancy E. Adler, Robert Nguyen, Andrea López, Dean Schillinger:
Social disparities in internet patient portal use in diabetes: evidence that the digital divide extends beyond access. 318-321 - Rajika L. Munasinghe, Camelia Arsene, Tarun K. Abraham, Marwan Zidan, Mohamed Siddique:
Improving the utilization of admission order sets in a computerized physician order entry system by integrating modular disease specific order subsets into a general medicine admission order set. 322-326
- Monique W. M. Jaspers, Marian Smeulers, Hester Vermeulen, Linda W. P. Peute:
Effects of clinical decision-support systems on practitioner performance and patient outcomes: a synthesis of high-quality systematic review findings. 327-334 - Andrew Georgiou, Mirela Prgomet, Andrew Markewycz, Edwina Adams, Johanna I. Westbrook:
The impact of computerized provider order entry systems on medical-imaging services: a systematic review. 335-340
- Rachel L. Richesson, Prakash M. Nadkarni:
Data standards for clinical research data collection forms: current status and challenges. 341-346
- Jyotishman Pathak, Christopher G. Chute:
Letter: Further revamping VA's NDF-RT drug terminology for clinical research. 347-348
- Edward H. Shortliffe:
AMIA president's message. 349-350
Volume 18, Number 4, July 2011
- Lucila Ohno-Machado:
Biomedical informatics: how we got here and where we are headed. 351
- Atul J. Butte, Nigam H. Shah:
Computationally translating molecular discoveries into tools for medicine: translational bioinformatics articles now featured in JAMIA. 352-353
- Indra Neil Sarkar, Atul J. Butte, Yves A. Lussier, Peter Tarczy-Hornoch, Lucila Ohno-Machado:
Translational bioinformatics: linking knowledge across biological and clinical realms. 354-357 - Russ B. Altman, Katharine S. Miller:
2010 Translational bioinformatics year in review. 358-366 - Isaac S. Kohane, Peter Szolovits:
Marco Ramoni: an appreciation of academic achievement. 367-369
- Brian P. McCune, Edward H. Shortliffe:
In Memoriam: Darlene P Vian. 369
- Wei Wei, Shyam Visweswaran, Gregory F. Cooper:
The application of naive Bayes model averaging to predict Alzheimer's disease from genome-wide data. 370-375 - Jyotishman Pathak, Janey Wang, Sudha Kashyap, Melissa A. Basford, Rongling Li, Daniel R. Masys, Christopher G. Chute:
Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience. 376-386 - Hua Xu, Min Jiang, Matthew Oetjens, Erica A. Bowton, Andrea H. Ramirez, Janina M. Jeff, Melissa A. Basford, Jill M. Pulley, James D. Cowan, Xiaoming Wang, Marylyn D. Ritchie, Daniel R. Masys, Dan M. Roden, Dana C. Crawford, Joshua C. Denny:
Facilitating pharmacogenetic studies using electronic health records and natural-language processing: a case study of warfarin. 387-391 - James L. Chen, Jianrong Li, Walter M. Stadler, Yves A. Lussier:
Protein-network modeling of prostate cancer gene signatures reveals essential pathways in disease recurrence. 392-402 - David J. Foran, Lin Yang, Wenjin Chen, Jun Hu, Lauri A. Goodell, Michael Reiss, Fusheng Wang, Tahsin M. Kurç, Tony Pan, Ashish Sharma, Joel H. Saltz:
ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology. 403-415 - Karl G. Helmer, José Luis Ambite, Joseph Ames, Rachana Ananthakrishnan, Gully Burns, Ann L. Chervenak, Ian T. Foster, Lee Liming, David B. Keator, Fabio Macciardi, Ravi K. Madduri, John-Paul Navarro, Steven G. Potkin, Bruce R. Rosen, Seth Ruffins, Robert Schuler, Jessica A. Turner, Arthur W. Toga, Christina Williams, Carl Kesselman:
Enabling collaborative research using the Biomedical Informatics Research Network (BIRN). 416-422 - Kevin W. Boyack, Paul Jordan:
Metrics associated with NIH funding: a high-level view. 423-431 - Alan L. Rector, Sam Brandt, Thomas Schneider:
Getting the foot out of the pelvis: modeling problems affecting use of SNOMED CT hierarchies in practical applications. 432-440 - Stuart J. Nelson, Kelly Zeng, John Kilbourne, Tammy Powell, Robin Moore:
Normalized names for clinical drugs: RxNorm at 6 years. 441-448 - Sharique Hasan, George T. Duncan, Daniel B. Neill, Rema Padman:
Automatic detection of omissions in medication lists. 449-458 - Guergana K. Savova, Wendy Webber Chapman, Jiaping Zheng, Rebecca S. Crowley:
Anaphoric relations in the clinical narrative: corpus creation. 459-465 - Randy J. Carnevale, Thomas R. Talbot, William Schaffner, Karen C. Bloch, Titus L. Daniels, Randolph A. Miller:
Evaluating the utility of syndromic surveillance algorithms for screening to detect potentially clonal hospital infection outbreaks. 466-472 - Katrin Kirchhoff, Anne M. Turner, Amittai Axelrod, Francisco Saavedra:
Application of statistical machine translation to public health information: a feasibility study. 473-478 - Hanna M. Seidling, Shobha Phansalkar, Diane L. Seger, Marilyn D. Paterno, Shimon Shaykevich, Walter E. Haefeli, David W. Bates:
Factors influencing alert acceptance: a novel approach for predicting the success of clinical decision support. 479-484 - Aaron E. Carroll, Paul G. Biondich, Vibha Anand, Tamara M. Dugan, Meena E. Sheley, Shawn Z. Xu, Stephen M. Downs:
Targeted screening for pediatric conditions with the CHICA system. 485-490 - Aldo Tinoco, R. Scott Evans, Catherine J. Staes, James F. Lloyd, Jeffrey M. Rothschild, Peter J. Haug:
Comparison of computerized surveillance and manual chart review for adverse events. 491-497 - Aziz A. Boxwala, Jihoon Kim, Janice M. Grillo, Lucila Ohno-Machado:
Using statistical and machine learning to help institutions detect suspicious access to electronic health records. 498-505
- Petra Welter, Jörg Riesmeier, Benedikt Fischer, Christoph Grouls, Christiane Kuhl, Thomas Martin Deserno:
Bridging the integration gap between imaging and information systems: a uniform data concept for content-based image retrieval in computer-aided diagnosis. 506-510
- Adam B. Wilcox, Yueh-Hsia Chen, George Hripcsak:
Minimizing electronic health record patient-note mismatches. 511-514
- Norman P. Archer, U. Fevrier-Thomas, Cynthia Lokker, K. Ann McKibbon, Sharon E. Straus:
Personal health records: a scoping review. 515-522 - Michael J. Ackerman, Craig Locatis:
Advanced networks and computing in healthcare. 523-528
- Robert S. Rudin:
Why clinicians use or don't use health information exchange. 529
- Miriam Bloom:
American College of Medical Informatics In Memoriam, 2009-2010. 530-536
- Edward H. Shortliffe:
AMIA president's column: AMIA and HIT policy activities. 537-538
Volume 18, Number 5, September 2011
- Lucila Ohno-Machado:
Realizing the full potential of electronic health records: the role of natural language processing. 539
- Wendy Webber Chapman, Prakash M. Nadkarni, Lynette Hirschman, Leonard W. D'Avolio, Guergana K. Savova, Özlem Uzuner:
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. 540-543
- Prakash M. Nadkarni, Lucila Ohno-Machado, Wendy Webber Chapman:
Natural language processing: an introduction. 544-551
- Özlem Uzuner, Brett R. South, Shuying Shen, Scott L. DuVall:
2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text. 552-556
- Berry de Bruijn, Colin Cherry, Svetlana Kiritchenko, Joel D. Martin, Xiaodan Zhu:
Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010. 557-562 - Cheryl Clark, John S. Aberdeen, Matthew Coarr, David Tresner-Kirsch, Ben Wellner, Alexander S. Yeh, Lynette Hirschman:
MITRE system for clinical assertion status classification. 563-567 - Kirk Roberts, Sanda M. Harabagiu:
A flexible framework for deriving assertions from electronic medical records. 568-573 - Jon D. Patrick, Dung H. M. Nguyen, Yefeng Wang, Min Li:
A knowledge discovery and reuse pipeline for information extraction in clinical notes. 574-579 - Manabu Torii, Kavishwar B. Wagholikar, Hongfang Liu:
Using machine learning for concept extraction on clinical documents from multiple data sources. 580-587 - Anne-Lyse Minard, Anne-Laure Ligozat, Asma Ben Abacha, Delphine Bernhard, Bruno Cartoni, Louise Deléger, Brigitte Grau, Sophie Rosset, Pierre Zweigenbaum, Cyril Grouin:
Hybrid methods for improving information access in clinical documents: concept, assertion, and relation identification. 588-593 - Bryan Rink, Sanda M. Harabagiu, Kirk Roberts:
Automatic extraction of relations between medical concepts in clinical texts. 594-600 - Min Jiang, Yukun Chen, Mei Liu, S. Trent Rosenbloom, Subramani Mani, Joshua C. Denny, Hua Xu:
A study of machine-learning-based approaches to extract clinical entities and their assertions from discharge summaries. 601-606 - Leonard W. D'Avolio, Thien M. Nguyen, Sergey Goryachev, Louis D. Fiore:
Automated concept-level information extraction to reduce the need for custom software and rules development. 607-613 - Vijay Garla, Vincent Lo Re III, Zachariah Dorey-Stein, Farah Kidwai, Matthew Scotch, Julie A. Womack, Amy Justice, Cynthia Brandt:
The Yale cTAKES extensions for document classification: architecture and application. 614-620 - James Hunter, Yvonne Freer, Albert Gatt,