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Ján Manuch
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Publications
- 2020
- [j38]Stefan Dobrev, Evangelos Kranakis, Danny Krizanc, Manuel Lafond, Ján Manuch, Lata Narayanan, Jaroslav Opatrny, Ladislav Stacho:
Weak Coverage of a Rectangular Barrier. Algorithmica 82(4): 721-746 (2020) - 2017
- [j36]Jozef Hales, Alice Héliou, Ján Manuch, Yann Ponty, Ladislav Stacho:
Combinatorial RNA Design: Designability and Structure-Approximating Algorithm in Watson-Crick and Nussinov-Jacobson Energy Models. Algorithmica 79(3): 835-856 (2017) - [c39]Stefan Dobrev, Evangelos Kranakis, Danny Krizanc, Manuel Lafond, Ján Manuch, Lata Narayanan, Jaroslav Opatrny, Sunil M. Shende, Ladislav Stacho:
Weak Coverage of a Rectangular Barrier. CIAC 2017: 196-208 - [i8]Stefan Dobrev, Evangelos Kranakis, Danny Krizanc, Manuel Lafond, Ján Manuch, Lata Narayanan, Jaroslav Opatrny, Ladislav Stacho:
Weak Coverage of a Rectangular Barrier. CoRR abs/1701.07294 (2017) - 2016
- [j33]Stefan Dobrev, Mohsen Eftekhari Hesari, Fraser MacQuarie, Ján Manuch, Oscar Morales-Ponce, Lata Narayanan, Jaroslav Opatrny, Ladislav Stacho:
Connectivity with directional antennas in the symmetric communication model. Comput. Geom. 55: 1-25 (2016) - [j32]David Doty, Ho-Lin Chen, Ján Manuch, Arash Rafiey, Ladislav Stacho:
Pattern overlap implies runaway growth in hierarchical tile systems. J. Comput. Geom. 7(2): 3-18 (2016) - 2015
- [j31]Jurek Czyzowicz, Stefan Dobrev, Benson L. Joeris, Evangelos Kranakis, Danny Krizanc, Ján Manuch, Oscar Morales-Ponce, Jaroslav Opatrny, Ladislav Stacho, Jorge Urrutia:
Monitoring the Plane with Rotating Radars. Graphs Comb. 31(2): 393-405 (2015) - [c37]Ho-Lin Chen, David Doty, Ján Manuch, Arash Rafiey, Ladislav Stacho:
Pattern Overlap Implies Runaway Growth in Hierarchical Tile Systems. SoCG 2015: 360-373 - [c36]Jozef Hales, Ján Manuch, Yann Ponty, Ladislav Stacho:
Combinatorial RNA Design: Designability and Structure-Approximating Algorithm. CPM 2015: 231-246 - [i7]Jozef Hales, Ján Manuch, Yann Ponty, Ladislav Stacho:
Combinatorial RNA Design: Designability and Structure-Approximating Algorithm. CoRR abs/1502.03201 (2015) - 2014
- [i4]Ho-Lin Chen, David Doty, Ján Manuch, Arash Rafiey, Ladislav Stacho:
Pattern overlap implies runaway growth in hierarchical tile systems. CoRR abs/1411.6672 (2014) - 2013
- [c35]Javad Safaei, Ján Manuch, Ladislav Stacho:
Learning Polytrees with Constant Number of Roots from Data. Australasian Conference on Artificial Intelligence 2013: 447-452 - 2012
- [j26]Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Algorithm for Haplotype Inference via Galled-Tree Networks with Simple Galls. J. Comput. Biol. 19(4): 439-454 (2012) - [j25]Ján Manuch, Ladislav Stacho, Christine Stoll:
Step-wise tile assembly with a constant number of tile types. Nat. Comput. 11(3): 535-550 (2012) - [c33]Bahar Behsaz, Ján Manuch, Ladislav Stacho:
Turing Universality of Step-Wise and Stage Assembly at Temperature 1. DNA 2012: 1-11 - 2011
- [j22]Ján Manuch, Chris Thachuk, Ladislav Stacho, Anne Condon:
NP-completeness of the energy barrier problem without pseudoknots and temporary arcs. Nat. Comput. 10(1): 391-405 (2011) - [c31]Javad Safaei, Ján Manuch, Arvind Gupta, Ladislav Stacho, Steven Pelech:
Evolutionary Conservation of Human Phosphorylation Sites. BIBM 2011: 222-227 - 2010
- [j21]Ján Manuch, Ladislav Stacho, Christine Stoll:
Two Lower Bounds for Self-Assemblies at Temperature 1. J. Comput. Biol. 17(6): 841-852 (2010) - [j20]Arvind Gupta, Mohammad M. Karimi, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Haplotype Inferring via Galled-Tree Networks Is NP-Complete. J. Comput. Biol. 17(10): 1435-1449 (2010) - [c27]Javad Safaei, Ján Manuch, Arvind Gupta, Ladislav Stacho, Steven Pelech:
Prediction of human protein kinase substrate specificities. BIBM 2010: 259-264 - [c25]Chris Thachuk, Ján Manuch, Arash Rafiey, Leigh-Anne Mathieson, Ladislav Stacho, Anne Condon:
An Algorithm for the Energy Barrier Problem Without Pseudoknots and Temporary Arcs. Pacific Symposium on Biocomputing 2010: 108-119 - 2009
- [j19]Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Haplotype inferring via galled-tree networks using a hypergraph covering problem for special genotype matrices. Discret. Appl. Math. 157(10): 2310-2324 (2009) - [j18]Hayri Ardal, Ján Manuch, Moshe Rosenfeld, Saharon Shelah, Ladislav Stacho:
The Odd-Distance Plane Graph. Discret. Comput. Geom. 42(2): 132-141 (2009) - [j17]Peter Adams, Hayri Ardal, Ján Manuch, Vu Dinh Hoa, Moshe Rosenfeld, Ladislav Stacho:
Spanning cubic graph designs. Discret. Math. 309(18): 5781-5788 (2009) - [c22]Ján Manuch, Chris Thachuk, Ladislav Stacho, Anne Condon:
NP-Completeness of the Direct Energy Barrier Problem without Pseudoknots. DNA 2009: 106-115 - [c21]Ján Manuch, Ladislav Stacho, Christine Stoll:
Step-Assembly with a Constant Number of Tile Types. ISAAC 2009: 954-963 - [c20]Ján Manuch, Ladislav Stacho, Christine Stoll:
Two lower bounds for self-assemblies at temperature 1. SAC 2009: 808-809 - 2008
- [j12]Arvind Gupta, Jan van den Heuvel, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
On the Complexity of Ordered Colorings. SIAM J. Discret. Math. 22(2): 832-847 (2008) - [c15]Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Haplotype Inferring Via Galled-Tree Networks Is NP-Complete. COCOON 2008: 287-298 - 2007
- [c12]Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls. ISBRA 2007: 121-132 - 2006
- [j11]Arvind Gupta, Ján Manuch, Xiaohong Zhao, Ladislav Stacho:
Characterization of the Existence of Galled-tree Networks. J. Bioinform. Comput. Biol. 4(6): 1309-1328 (2006) - [c10]Ján Manuch, Xiaohong Zhao, Ladislav Stacho, Arvind Gupta:
Characterization of the Existence of Galled-Tree Networks. APBC 2006: 297-306 - 2005
- [j10]Arvind Gupta, Ján Manuch, Ladislav Stacho, Xiaohong Zhao:
Ordered 3-colorings. Electron. Notes Discret. Math. 22: 299-300 (2005) - [j9]Arvind Gupta, Ján Manuch, Ladislav Stacho:
Structure-Approximating Inverse Protein Folding Problem in the 2D HP Model. J. Comput. Biol. 12(10): 1328-1345 (2005) - [j8]Petra Berenbrink, Tom Friedetzky, Ján Manuch, Ladislav Stacho:
(quasi) Spanners for Mobile Ad Hoc Networks. J. Interconnect. Networks 6(2): 63-84 (2005) - 2004
- [c8]Arvind Gupta, Ján Manuch, Ladislav Stacho, Chenchen Zhu:
Small Phylogeny Problem: Character Evolution Trees. CPM 2004: 230-243 - [c7]Arvind Gupta, Ján Manuch, Ladislav Stacho:
Inverse Protein Folding in 2D HP Mode (Extended Abstract). CSB 2004: 311-318 - [c6]Arvind Gupta, Ján Manuch, Ladislav Stacho:
Fault Tolerant Forwarding and Optical Indexes: A Design Theory Approach. SIROCCO 2004: 197-208 - 2003
- [j7]Ján Manuch, Ladislav Stacho:
On f-wise Arc Forwarding Index and Wavelength Allocations in Faulty All-optical Hypercubes. RAIRO Theor. Informatics Appl. 37(3): 255-270 (2003)
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