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Berry de Bruijn
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2020 – today
- 2020
- [c9]Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn:
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience. BioNLP 2020: 177-186 - [c8]Dave Carter
, Marta Stojanovic, Philip Hachey, Kevin Fournier, Simon Rodier, Yunli Wang, Berry de Bruijn:
Global Public Health Surveillance Using Media Reports: Redesigning GPHIN. MIE 2020: 843-847 - [e1]Karin Verspoor, Kevin Bretonnel Cohen, Michael Conway, Berry de Bruijn, Mark Dredze, Rada Mihalcea, Byron C. Wallace:
Proceedings of the 1st Workshop on NLP for COVID-19@ EMNLP 2020, Online, December 2020. Association for Computational Linguistics 2020 [contents] - [i4]Dave Carter
, Marta Stojanovic, Philip Hachey, Kevin Fournier, Simon Rodier, Yunli Wang, Berry de Bruijn:
Global Public Health Surveillance using Media Reports: Redesigning GPHIN. CoRR abs/2004.04596 (2020) - [i3]Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn:
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience. CoRR abs/2006.05281 (2020)
2010 – 2019
- 2019
- [c7]Isar Nejadgholi, Kathleen C. Fraser, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine:
Recognizing UMLS Semantic Types with Deep Learning. LOUHI@EMNLP 2019: 157-167 - [i2]Kathleen C. Fraser, Isar Nejadgholi, Berry de Bruijn, Muqun Li, Astha LaPlante, Khaldoun Zine El Abidine:
Extracting UMLS Concepts from Medical Text Using General and Domain-Specific Deep Learning Models. CoRR abs/1910.01274 (2019) - 2018
- [j9]Abeed Sarker
, Maksim Belousov
, Jasper Friedrichs, Kai Hakala, Svetlana Kiritchenko
, Farrokh Mehryary
, Sifei Han
, Tung Tran, Anthony Rios
, Ramakanth Kavuluru, Berry de Bruijn, Filip Ginter, Debanjan Mahata, Saif M. Mohammad, Goran Nenadic, Graciela Gonzalez-Hernandez
:
Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task. J. Am. Medical Informatics Assoc. 25(10): 1274-1283 (2018) - [i1]Svetlana Kiritchenko, Saif M. Mohammad, Jason Morin, Berry de Bruijn:
NRC-Canada at SMM4H Shared Task: Classifying Tweets Mentioning Adverse Drug Reactions and Medication Intake. CoRR abs/1805.04558 (2018) - 2017
- [c6]Svetlana Kiritchenko, Saif M. Mohammad, Jason Morin, Berry de Bruijn:
NRC-Canada at SMM4H Shared Task: Classifying Tweets Mentioning Adverse Drug Reactions and Medication Intake. SMM4H@AMIA 2017: 1-11 - 2013
- [j8]Colin Cherry, Xiaodan Zhu, Joel D. Martin, Berry de Bruijn:
À la Recherche du Temps Perdu: extracting temporal relations from medical text in the 2012 i2b2 NLP challenge. J. Am. Medical Informatics Assoc. 20(5): 843-848 (2013) - [j7]Xiaodan Zhu, Colin Cherry, Svetlana Kiritchenko
, Joel D. Martin, Berry de Bruijn:
Detecting concept relations in clinical text: Insights from a state-of-the-art model. J. Biomed. Informatics 46(2): 275-285 (2013) - 2011
- [j6]Berry de Bruijn, Colin Cherry, Svetlana Kiritchenko
, Joel D. Martin, Xiaodan Zhu:
Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010. J. Am. Medical Informatics Assoc. 18(5): 557-562 (2011) - [c5]Berry de Bruijn:
Revisiting the Area Under the ROC. MIE 2011: 532-536 - 2010
- [j5]Svetlana Kiritchenko
, Berry de Bruijn, Simona Carini, Joel D. Martin, Ida Sim:
ExaCT: automatic extraction of clinical trial characteristics from journal publications. BMC Medical Informatics Decis. Mak. 10: 56 (2010)
2000 – 2009
- 2008
- [c4]Berry de Bruijn, Simona Carini, Svetlana Kiritchenko, Joel D. Martin, Ida Sim:
Automated Information Extraction of Key Trial Design Elements from Clinical Trial Publications. AMIA 2008 - 2006
- [j4]Berry de Bruijn, Ann Cranney, Siobhan O'Donnell, Joel D. Martin, Alan J. Forster:
Case Report: Identifying Wrist Fracture Patients with High Accuracy by Automatic Categorization of X-ray Reports. J. Am. Medical Informatics Assoc. 13(6): 696-698 (2006) - 2003
- [j3]Ian M. Donaldson, Joel D. Martin, Berry de Bruijn, Cheryl Wolting, Vicki Lay, Brigitte Tuekam, Shudong Zhang, Berivan Baskin, Gary D. Bader
, Katerina Michalickova, Tony Pawson, Christopher W. V. Hogue
:
PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine. BMC Bioinform. 4: 11 (2003) - [c3]Jeffrey Demaine
, Joel D. Martin, Berry de Bruijn:
Haystacks and hypotheses. ASIST 2003: 59-64 - [c2]Berry de Bruijn, Joel D. Martin:
Finiding Gene Function using LitMiner. TREC 2003: 451-459 - 2002
- [j2]Berry de Bruijn, Joel D. Martin:
Getting to the (c)ore of knowledge: mining biomedical literature. Int. J. Medical Informatics 67(1-3): 7-18 (2002) - 2001
- [c1]Alain Désilets, Berry de Bruijn, Joel D. Martin:
Extracting Keyphrases from Spoken Audio Documents. SIGIR Workshop: Information Retrieval Techniques for Speech Applications 2001: 36-50 - 2000
- [j1]Berry de Bruijn, Arie Hasman, Jan Willem Arends:
Supporting the classification of pathology reports: comparing two information retrieval methods. Comput. Methods Programs Biomed. 62(2): 109-113 (2000)
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