![](https://dblp.dagstuhl.de/img/logo.ua.320x120.png)
![](https://dblp.dagstuhl.de/img/dropdown.dark.16x16.png)
![](https://dblp.dagstuhl.de/img/peace.dark.16x16.png)
Остановите войну!
for scientists:
![search dblp search dblp](https://dblp.dagstuhl.de/img/search.dark.16x16.png)
![search dblp](https://dblp.dagstuhl.de/img/search.dark.16x16.png)
default search action
James C. Schaff
Person information
Refine list
![note](https://dblp.dagstuhl.de/img/note-mark.dark.12x12.png)
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
Journal Articles
- 2023
- [j14]James C. Schaff
, Anuradha Lakshminarayana, Robert F. Murphy
, Frank T. Bergmann
, Akira Funahashi
, Devin P. Sullivan
, Lucian P. Smith
:
SBML level 3 package: spatial processes, version 1, release 1. J. Integr. Bioinform. 20(1) (2023) - 2022
- [j13]Bilal Shaikh
, Lucian P. Smith
, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson
, Eran Agmon
, Henry Agnew
, Steven S. Andrews
, Azraf Anwar, Moritz E. Beber
, Frank T. Bergmann
, David Brooks
, Lutz Brusch
, Laurence Calzone
, Kiri Choi
, Joshua Cooper, John Detloff, Brian Drawert
, Michel Dumontier
, G. Bard Ermentrout
, James R. Faeder
, Andrew P. Freiburger
, Fabian Fröhlich
, Akira Funahashi
, Alan Garny
, John H. Gennari
, Padraig Gleeson
, Anne Goelzer
, Zachary B. Haiman
, Jan Hasenauer
, Joseph L. Hellerstein
, Henning Hermjakob
, Stefan Hoops
, Jon C. Ison
, Diego Jahn
, Henry V. Jakubowski
, Ryann Jordan, Matús Kalas
, Matthias König
, Wolfram Liebermeister
, Rahuman S. Malik-Sheriff
, Synchon Mandal
, Robert A. McDougal
, J. Kyle Medley, Pedro Mendes
, Robert Müller, Chris J. Myers
, Aurélien Naldi
, Tung V. N. Nguyen
, David P. Nickerson
, Brett G. Olivier
, Drashti Patoliya, Loïc Paulevé
, Linda R. Petzold
, Ankita Priya, Anand K. Rampadarath
, Johann M. Rohwer
, Ali Sinan Saglam
, Dilawar Singh
, Ankur Sinha
, Jacky L. Snoep
, Hugh Sorby
, Ryan K. Spangler
, Jörn Starruß
, Payton J. Thomas
, David D. van Niekerk, Daniel Weindl
, Fengkai Zhang
, Anna Zhukova
, Arthur P. Goldberg
, James C. Schaff
, Michael L. Blinov
, Herbert M. Sauro
, Ion I. Moraru
, Jonathan R. Karr
:
BioSimulators: a central registry of simulation engines and services for recommending specific tools. Nucleic Acids Res. 50(W1): 108-114 (2022) - 2019
- [j12]Michael Hucka
, Frank T. Bergmann
, Claudine Chaouiya
, Andreas Dräger
, Stefan Hoops
, Sarah M. Keating
, Matthias König
, Nicolas Le Novère, Chris J. Myers
, Brett G. Olivier
, Sven Sahle, James C. Schaff
, Rahuman S. Malik-Sheriff
, Lucian P. Smith
, Dagmar Waltemath
, Darren J. Wilkinson
, Fengkai Zhang
:
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2. J. Integr. Bioinform. 16(2) (2019) - 2018
- [j11]Michael Hucka
, Frank T. Bergmann
, Andreas Dräger
, Stefan Hoops, Sarah M. Keating
, Nicolas Le Novère, Chris J. Myers
, Brett G. Olivier
, Sven Sahle, James C. Schaff, Lucian P. Smith, Dagmar Waltemath, Darren J. Wilkinson:
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core. J. Integr. Bioinform. 15(1) (2018) - [j10]Michael Hucka
, Frank T. Bergmann
, Andreas Dräger
, Stefan Hoops, Sarah M. Keating
, Nicolas Le Novère, Chris J. Myers
, Brett G. Olivier
, Sven Sahle, James C. Schaff, Lucian P. Smith
, Dagmar Waltemath, Darren J. Wilkinson
:
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core. J. Integr. Bioinform. 15(1) (2018) - 2016
- [j9]James C. Schaff, Dan Vasilescu, Ion I. Moraru
, Leslie M. Loew, Michael L. Blinov
:
Rule-based modeling with Virtual Cell. Bioinform. 32(18): 2880-2882 (2016) - [j8]James C. Schaff
, Fei Gao, Li Ye, Igor L. Novak, Boris M. Slepchenko:
Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology. PLoS Comput. Biol. 12(12) (2016) - 2015
- [j7]Anthony Santella, Raúl Catena, Ismar Kovacevic, Pavak K. Shah
, Zidong Yu, Javier Marquina-Solis
, Abhishek Kumar
, Yicong Wu, James C. Schaff, Daniel Colón-Ramos, Hari Shroff, William Mohler, Zhirong Bao
:
WormGUIDES: an interactive single cell developmental atlas and tool for collaborative multidimensional data exploration. BMC Bioinform. 16: 189:1-189:9 (2015) - [j6]Michael Hucka
, Frank T. Bergmann
, Andreas Dräger
, Stefan Hoops, Sarah M. Keating
, Nicolas Le Novère, Chris J. Myers
, Brett G. Olivier
, Sven Sahle, James C. Schaff, Lucian P. Smith
, Dagmar Waltemath, Darren J. Wilkinson
:
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions. J. Integr. Bioinform. 12(2) (2015) - [j5]Michael Hucka
, Frank T. Bergmann
, Stefan Hoops, Sarah M. Keating
, Sven Sahle, James C. Schaff, Lucian P. Smith
, Darren J. Wilkinson
:
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core. J. Integr. Bioinform. 12(2) (2015) - 2014
- [j4]Michael L. Blinov
, James C. Schaff, Oliver Ruebenacker, Xintao Wei, Dan Vasilescu, Fei Gao, Frank Morgan, Li Ye, Anuradha Lakshminarayana, Ion I. Moraru
, Leslie M. Loew
:
Pathway Commons at Virtual Cell: use of pathway data for mathematical modeling. Bioinform. 30(2): 292-294 (2014) - 2011
- [j3]Sherry-Ann Brown
, Ion I. Moraru
, James C. Schaff, Leslie M. Loew
:
Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. J. Comput. Neurosci. 31(2): 385-400 (2011) - 2007
- [j2]Igor L. Novak, Fei Gao, Yung-Sze Choi, Diana Resasco, James C. Schaff, Boris M. Slepchenko:
Diffusion on a curved surface coupled to diffusion in the volume: Application to cell biology. J. Comput. Phys. 226(2): 1271-1290 (2007) - 2003
- [j1]Michael Hucka
, Andrew Finney, Herbert M. Sauro
, H. Bolouri, John C. Doyle, Hiroaki Kitano, Adam P. Arkin
, Benjamin J. Bornstein, Dennis Bray, Athel Cornish-Bowden
, Autumn A. Cuellar, Serge Dronov, Ernst Dieter Gilles, Martin Ginkel, Victoria Gor, Igor Goryanin
, W. J. Hedley, T. Charles Hodgman
, Jan-Hendrik S. Hofmeyr, Peter J. Hunter
, Nick S. Juty
, J. L. Kasberger, Andreas Kremling, Ursula Kummer, Nicolas Le Novère, Leslie M. Loew
, D. Lucio, Pedro Mendes
, E. Minch, Eric Mjolsness, Yoichi Nakayama, M. R. Nelson, Poul M. F. Nielsen, T. Sakurada, James C. Schaff, Bruce E. Shapiro, Thomas Simon Shimizu, Hugh D. Spence, Jörg Stelling, Koichi Takahashi, Masaru Tomita, J. Wagner, J. Wang:
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinform. 19(4): 524-531 (2003)
Conference and Workshop Papers
- 2010
- [c7]Michael L. Blinov
, Oliver Ruebenacker, James C. Schaff, Ion I. Moraru
:
Modeling without Borders: Creating and Annotating VCell Models Using the Web. ISBRA 2010: 3-17 - 2007
- [c6]Oliver Ruebenacker, Ion I. Moraru, James C. Schaff, Michael L. Blinov:
Kinetic Modeling Using BioPAX Ontology. BIBM 2007: 339-348 - 2006
- [c5]Ion I. Moraru
, James C. Schaff, Leslie M. Loew
:
Think simulation - think experiment: the virtual cell paradigm. WSC 2006: 1713-1719 - 1999
- [c4]M. A. Sapia, Leslie M. Loew, M. D. Fox, James C. Schaff:
Ultrasound Image Deconvolution Using Adaptive Inverse Filtering. CBMS 1999: 248-253 - [c3]James C. Schaff:
A Distributed Architecture for a General Cellular Modeling and Simulation Framework. CBMS 1999: 303- - [c2]James C. Schaff, Leslie M. Loew:
The Virtual Cell. Pacific Symposium on Biocomputing 1999: 228-239 - 1998
- [c1]Dong-Guk Shin, Lei Liu, Leslie M. Loew, James C. Schaff:
Virtual Cell: A General Framework for Simulating and Visualizing Cellular Physiology. VDB 1998: 214-220
Coauthor Index
![](https://dblp.dagstuhl.de/img/cog.dark.24x24.png)
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-09-02 00:09 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint