![](https://dblp.dagstuhl.de/img/logo.ua.320x120.png)
![](https://dblp.dagstuhl.de/img/dropdown.dark.16x16.png)
![](https://dblp.dagstuhl.de/img/peace.dark.16x16.png)
Остановите войну!
for scientists:
![search dblp search dblp](https://dblp.dagstuhl.de/img/search.dark.16x16.png)
![search dblp](https://dblp.dagstuhl.de/img/search.dark.16x16.png)
default search action
Géraldine Jean
Person information
Refine list
![note](https://dblp.dagstuhl.de/img/note-mark.dark.12x12.png)
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
Books and Theses
- 2008
- [b1]Géraldine Jean:
In silico methods for genome rearrangement analysis: from identification of common markers to ancestral reconstruction. (Méthodes in silico pour l'étude des réarrangements génomiques : de l'identification de marqueurs communs à la reconstruction ancestrale). University of Bordeaux, France, 2008
Journal Articles
- 2023
- [j18]Grégoire Prunier, Mehdi Cherkaoui, Albane Lysiak, Olivier Langella, Mélisande Blein-Nicolas, Virginie Lollier, Emile Benoist, Géraldine Jean, Guillaume Fertin, Hélène Rogniaux, Dominique Tessier:
Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides. BMC Bioinform. 24(1): 421 (2023) - [j17]Alexsandro Oliveira Alexandrino
, Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin, Ulisses Dias
, Zanoni Dias
:
Reversal and Transposition Distance on Unbalanced Genomes Using Intergenic Information. J. Comput. Biol. 30(8): 861-876 (2023) - [j16]Andre Rodrigues Oliveira
, Alexsandro Oliveira Alexandrino
, Géraldine Jean
, Guillaume Fertin
, Ulisses Dias
, Zanoni Dias
:
Approximation algorithms for sorting by k-cuts on signed permutations. J. Comb. Optim. 45(1): 6 (2023) - 2021
- [j15]Laurent Bulteau
, Guillaume Fertin
, Géraldine Jean
, Christian Komusiewicz
:
Sorting by Multi-Cut Rearrangements. Algorithms 14(6): 169 (2021) - [j14]Albane Lysiak, Guillaume Fertin
, Géraldine Jean, Dominique Tessier:
Evaluation of open search methods based on theoretical mass spectra comparison. BMC Bioinform. 22-S(2): 65 (2021) - [j13]Andre Rodrigues Oliveira
, Géraldine Jean, Guillaume Fertin
, Klairton Lima Brito
, Ulisses Dias
, Zanoni Dias
:
Sorting Permutations by Intergenic Operations. IEEE ACM Trans. Comput. Biol. Bioinform. 18(6): 2080-2093 (2021) - [j12]Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin
, Klairton Lima Brito
, Laurent Bulteau
, Ulisses Dias
, Zanoni Dias
:
Sorting Signed Permutations by Intergenic Reversals. IEEE ACM Trans. Comput. Biol. Bioinform. 18(6): 2870-2876 (2021) - [j11]Guillaume Fertin
, Julien Fradin, Géraldine Jean
:
The Maximum Colorful Arborescence problem: How (computationally) hard can it be? Theor. Comput. Sci. 852: 104-120 (2021) - 2020
- [j10]Klairton Lima Brito
, Géraldine Jean, Guillaume Fertin
, Andre Rodrigues Oliveira
, Ulisses Dias
, Zanoni Dias:
Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes. J. Comput. Biol. 27(2): 156-174 (2020) - 2019
- [j9]Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin
, Ulisses Dias
, Zanoni Dias
:
Super short operations on both gene order and intergenic sizes. Algorithms Mol. Biol. 14(1): 21:1-21:17 (2019) - 2018
- [j8]Guillaume Fertin
, Loïc Jankowiak, Géraldine Jean:
Prefix and suffix reversals on strings. Discret. Appl. Math. 246: 140-153 (2018) - 2017
- [j7]Guillaume Fertin
, Géraldine Jean, Eric Tannier:
Algorithms for computing the double cut and join distance on both gene order and intergenic sizes. Algorithms Mol. Biol. 12(1): 16:1-16:11 (2017) - 2014
- [j6]Vipin T. Sreedharan, Sebastian J. Schultheiß
, Géraldine Jean, André Kahles, Regina Bohnert, Philipp Drewe, Pramod Mudrakarta, Nico Görnitz, Georg Zeller
, Gunnar Rätsch
:
Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis. Bioinform. 30(9): 1300-1301 (2014) - [j5]Vipin T. Sreedharan, Sebastian J. Schultheiß
, Géraldine Jean, André Kahles, Regina Bohnert, Philipp Drewe, Pramod Mudrakarta, Nico Görnitz, Georg Zeller, Gunnar Rätsch
:
Oqtans: a multifunctional workbench for RNA-seq data analysis. BMC Bioinform. 15(S-3): A7 (2014) - 2011
- [j4]Sebastian J. Schultheiß
, Géraldine Jean, Jonas Behr, Regina Bohnert, Philipp Drewe, Nico Görnitz, André Kahles, Pramod Mudrakarta, Vipin T. Sreedharan, Georg Zeller, Gunnar Rätsch
:
Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data. BMC Bioinform. 12(S-11): A7 (2011) - [j3]Géraldine Jean, Macha Nikolski:
SyDiG: uncovering Synteny in Distant Genomes. Int. J. Bioinform. Res. Appl. 7(1): 43-62 (2011) - 2009
- [j2]Géraldine Jean, David James Sherman
, Macha Nikolski:
Mining the Semantics of Genome Super-Blocks to Infer Ancestral Architectures. J. Comput. Biol. 16(9): 1267-1284 (2009) - 2007
- [j1]Géraldine Jean, Macha Nikolski:
Genome rearrangements: a correct algorithm for optimal capping. Inf. Process. Lett. 104(1): 14-20 (2007)
Conference and Workshop Papers
- 2023
- [c14]Gabriel Siqueira
, Alexsandro Oliveira Alexandrino
, Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin
, Zanoni Dias
:
Approximating Rearrangement Distances with Replicas and Flexible Intergenic Regions. ISBRA 2023: 241-254 - 2022
- [c13]Guillaume Fertin
, Oscar Fontaine, Géraldine Jean
, Stéphane Vialette
:
The Maximum Zero-Sum Partition Problem. ICS 2022: 73-85 - [c12]Alexsandro Oliveira Alexandrino
, Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin
, Ulisses Dias
, Zanoni Dias
:
Transposition Distance Considering Intergenic Regions for Unbalanced Genomes. ISBRA 2022: 100-113 - [c11]Andre Rodrigues Oliveira
, Alexsandro Oliveira Alexandrino
, Géraldine Jean
, Guillaume Fertin
, Ulisses Dias
, Zanoni Dias
:
Sorting by k-Cuts on Signed Permutations. RECOMB-CG 2022: 189-204 - [c10]Guillaume Fertin
, Géraldine Jean
, Anthony Labarre
:
Sorting Genomes by Prefix Double-Cut-and-Joins. SPIRE 2022: 178-190 - [c9]Emile Benoist, Guillaume Fertin
, Géraldine Jean
:
The Exact Subset MultiCover Problem. TAMC 2022: 189-200 - 2021
- [c8]Laurent Bulteau, Guillaume Fertin
, Géraldine Jean
, Christian Komusiewicz
:
Sorting by Multi-cut Rearrangements. SOFSEM 2021: 593-607 - 2020
- [c7]Andre Rodrigues Oliveira
, Géraldine Jean
, Guillaume Fertin
, Klairton Lima Brito
, Ulisses Dias
, Zanoni Dias
:
A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions. AlCoB 2020: 16-28 - 2019
- [c6]Klairton Lima Brito
, Géraldine Jean
, Guillaume Fertin
, Andre Rodrigues Oliveira
, Ulisses Dias
, Zanoni Dias
:
Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes. ISBRA 2019: 28-39 - 2018
- [c5]Andre Rodrigues Oliveira
, Géraldine Jean, Guillaume Fertin
, Ulisses Dias
, Zanoni Dias
:
Super Short Reversals on Both Gene Order and Intergenic Sizes. BSB 2018: 14-25 - 2017
- [c4]Guillaume Fertin
, Julien Fradin, Géraldine Jean:
Algorithmic Aspects of the Maximum Colorful Arborescence Problem. TAMC 2017: 216-230 - 2016
- [c3]Guillaume Fertin
, Géraldine Jean, Eric Tannier:
Genome Rearrangements on Both Gene Order and Intergenic Regions. WABI 2016: 162-173 - 2015
- [c2]Guillaume Fertin
, Loïc Jankowiak, Géraldine Jean:
Prefix and Suffix Reversals on Strings. SPIRE 2015: 165-176 - 2014
- [c1]Guillaume Fertin
, Géraldine Jean, Andreea Radulescu, Irena Rusu:
DExTaR: Detection of exact tandem repeats based on the de Bruijn graph. BIBM 2014: 90-93
Parts in Books or Collections
- 2017
- [p1]Géraldine Jean, Andreea Radulescu, Irena Rusu:
The Contig Assembly Problem and Its Algorithmic Solutions. Algorithms for Next-Generation Sequencing Data 2017: 267-298
Informal and Other Publications
- 2022
- [i1]Guillaume Fertin, Géraldine Jean, Anthony Labarre:
Sorting Genomes by Prefix Double-Cut-and-Joins. CoRR abs/2208.14315 (2022)
Coauthor Index
![](https://dblp.dagstuhl.de/img/cog.dark.24x24.png)
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-04-25 05:51 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint