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ORCIDEmidio Capriotti
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Journal Articles
- 2023
[j25]Emidio Capriotti
, Piero Fariselli:
PhD-SNPg: updating a webserver and lightweight tool for scoring nucleotide variants. Nucleic Acids Res. 51(W1): 451-458 (2023)- 2022
- [j24]Corrado Pancotti, Silvia Benevenuta, Giovanni Birolo, Virginia Alberini, Valeria Repetto, Tiziana Sanavia, Emidio Capriotti, Piero Fariselli:
Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset. Briefings Bioinform. 23(2) (2022) - [j23]Ludovica Montanucci, Emidio Capriotti, Giovanni Birolo, Silvia Benevenuta, Corrado Pancotti, Dennis Lal, Piero Fariselli:
DDGun: an untrained predictor of protein stability changes upon amino acid variants. Nucleic Acids Res. 50(W1): 222-227 (2022) - 2021
- [j22]Silvia Benevenuta, Emidio Capriotti, Piero Fariselli:
Calibrating variant-scoring methods for clinical decision making. Bioinform. 36(24): 5709-5711 (2021) - 2019
- [j21]Ludovica Montanucci, Emidio Capriotti, Yotam Frank, Nir Ben-Tal, Piero Fariselli:
DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations. BMC Bioinform. 20-S(14): 335:1-335:10 (2019) - [j20]Emidio Capriotti, Ludovica Montanucci, Giuseppe Profiti, Ivan Rossi, Diana Giannuzzi, Luca Aresu, Piero Fariselli:
Fido-SNP: the first webserver for scoring the impact of single nucleotide variants in the dog genome. Nucleic Acids Res. 47(Webserver-Issue): W136-W141 (2019) - 2017
- [j19]Emidio Capriotti, Piero Fariselli:
PhD-SNPg: a webserver and lightweight tool for scoring single nucleotide variants. Nucleic Acids Res. 45(Webserver-Issue): W247-W252 (2017) - 2015
- [j18]Yana Bromberg, Emidio Capriotti:
Editor's Choice: SNP-SIG 2013: the state of the art of genomic variant interpretation. Bioinform. 31(3): 449-450 (2015) - [j17]Jacinte Beerten, Joost J. J. van Durme, Rodrigo Gallardo, Emidio Capriotti, Louise C. Serpell, Frederic Rousseau, Joost Schymkowitz:
WALTZ-DB: a benchmark database of amyloidogenic hexapeptides. Bioinform. 31(10): 1698-1700 (2015) - 2014
- [j16]Rui Tian, Malay Kumar Basu, Emidio Capriotti:
ContrastRank: a new method for ranking putative cancer driver genes and classification of tumor samples. Bioinform. 30(17): 572-578 (2014) - [j15]Paolo Di Tommaso, Giovanni Bussotti, Carsten Kemena, Emidio Capriotti, Maria Chatzou, Pablo Prieto, Cédric Notredame:
SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments. Nucleic Acids Res. 42(Webserver-Issue): 356-360 (2014) - 2013
- [j14]Carsten Kemena, Giovanni Bussotti, Emidio Capriotti, Marc A. Martí-Renom, Cédric Notredame:
Using tertiary structure for the computation of highly accurate multiple RNA alignments with the SARA-Coffee package. Bioinform. 29(9): 1112-1119 (2013) - [j13]Tomás Norambuena, Jorge F. Cares, Emidio Capriotti, Francisco Melo:
WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures. Bioinform. 29(20): 2649-2650 (2013) - 2012
- [j12]Emidio Capriotti, Nathan L. Nehrt, Maricel G. Kann, Yana Bromberg:
Bioinformatics for personal genome interpretation. Briefings Bioinform. 13(4): 495-512 (2012) - 2011
- [j11]Emidio Capriotti, Tomás Norambuena, Marc A. Martí-Renom, Francisco Melo:
All-atom knowledge-based potential for RNA structure prediction and assessment. Bioinform. 27(8): 1086-1093 (2011) - [j10]Guy Haskin Fernald, Emidio Capriotti, Roxana Daneshjou, Konrad J. Karczewski, Russ B. Altman:
Genome Analysis. Bioinform. 27(13): 1741-1748 (2011) - [j9]Guy Haskin Fernald, Emidio Capriotti, Roxana Daneshjou, Konrad J. Karczewski, Russ B. Altman:
Bioinformatics challenges for personalized medicine. Bioinform. 27(16): 2323 (2011) - [j8]Emidio Capriotti, Russ B. Altman:
Improving the prediction of disease-related variants using protein three-dimensional structure. BMC Bioinform. 12(S-4): S3 (2011) - 2010
- [j7]Emidio Capriotti, Marc A. Martí-Renom:
Quantifying the relationship between sequence and three-dimensional structure conservation in RNA. BMC Bioinform. 11: 322 (2010) - 2009
- [j6]Emidio Capriotti, Marc A. Martí-Renom:
SARA: a server for function annotation of RNA structures. Nucleic Acids Res. 37(Web-Server-Issue): 260-265 (2009) - 2008
- [j5]Emidio Capriotti, Piero Fariselli, Ivan Rossi, Rita Casadio:
A three-state prediction of single point mutations on protein stability changes. BMC Bioinform. 9(S-2) (2008) - 2007
- [j4]Piero Fariselli, Ivan Rossi, Emidio Capriotti, Rita Casadio:
The WWWH of remote homolog detection: The state of the art. Briefings Bioinform. 8(2): 78-87 (2007) - [j3]Emidio Capriotti, Rita Casadio:
K-Fold: a tool for the prediction of the protein folding kinetic order and rate. Bioinform. 23(3): 385-386 (2007) - 2006
- [j2]Emidio Capriotti, Remo Calabrese, Rita Casadio:
Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information. Bioinform. 22(22): 2729-2734 (2006) - 2005
- [j1]Emidio Capriotti, Piero Fariselli, Rita Casadio:
I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure. Nucleic Acids Res. 33(Web-Server-Issue): 306-310 (2005)
Conference and Workshop Papers
- 2019
- [c5]Linlin Zhao, Nima Abedpour, Christopher Blum, Petra Kolkhof, Mathias Beller, Markus Kollmann, Emidio Capriotti:
Predicting gene expression level in E. coli from mRNA sequence information. CIBCB 2019: 1-8 - 2011
- [c4]Can Alkan, Emidio Capriotti, Eleazar Eskin, Fereydoun Hormozdiari, Maricel G. Kann:
Session Introduction. Pacific Symposium on Biocomputing 2011: 229-230 - 2008
- [c3]Emidio Capriotti, Marc A. Martí-Renom:
RNA structure alignment by a unit-vector approach. ECCB 2008: 112-118 - 2005
- [c2]Emidio Capriotti, Piero Fariselli, Remo Calabrese, Rita Casadio:
Predicting protein stability changes from sequences using support vector machines. ECCB/JBI 2005: 58 - 2004
- [c1]Emidio Capriotti, Piero Fariselli, Rita Casadio:
A neural-network-based method for predicting protein stability changes upon single point mutations. ISMB/ECCB (Supplement of Bioinformatics) 2004: 63-68
Coauthor Index
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