Stop the war!Остановите войну!
for scientists:
default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDShuaicheng Li 0001
Person information
- unicode name: 李帥成
- affiliation: City University of Hong Kong, Kowloon, Hong Kong
- affiliation: University of California, Berkeley, International Computer Science Institute, CA, USA
- affiliation (PhD): University of Waterloo, David R. Cheriton School of Computer Science, ON, Canada
- affiliation: National University of Singapore, Department of Computer Science, Singapore
Other persons with the same name
- Shuaicheng Li (aka: Shuai-Cheng Li, Shuai Cheng Li) — disambiguation page
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
[j49]Wei Zhang
, Jia Ju, Yong Zhou, Teng Xiong, Mengyao Wang, Chaohui Li, Shixin Lu, Zefeng Lu, Liya Lin, Xiao Liu, Shuaicheng Li:
IMperm: a fast and comprehensive IMmune Paired-End Reads Merger for sequencing data. Briefings Bioinform. 24(2) (2023)- [j48]Xueying Wang, Lingxi Chen, Wei Liu, Yuanzheng Zhang, Dawei Liu, Chenxin Zhou, Shuai Shi, Jiajie Dong, Zhengtao Lai, Bingran Zhao, Wenjingyu Zhang, Haoyue Cheng, Shuaicheng Li:
TIMEDB: tumor immune micro-environment cell composition database with automatic analysis and interactive visualization. Nucleic Acids Res. 51(D1): 1417-1424 (2023) - 2022
- [j47]Ruohan Wang, Xiang-Li-Lan Zhang, Jianping Wang, Shuai Cheng Li:
DeepHost: phage host prediction with convolutional neural network. Briefings Bioinform. 23(1) (2022) - [j46]Ruohan Wang, Yuwei Zhang, Mengbo Wang, Xikang Feng, Jianping Wang, Shuai Cheng Li:
Resolving single-cell copy number profiling for large datasets. Briefings Bioinform. 23(4) (2022) - [j45]Jiaxing Chen, Yen Kaow Ng, Lu Lin, Xianglilan Zhang, Shuaicheng Li:
Correction: On triangle inequalities of correlation-based distances for gene expression profiles. BMC Bioinform. 23-S(3): 571 (2022) - 2021
- [j44]Wenlong Jia, Chang Xu, Shuai Cheng Li:
Resolving complex structures at oncovirus integration loci with conjugate graph. Briefings Bioinform. 22(6) (2021) - [j43]Shuai Wang, Yiqi Jiang, Shuai Cheng Li:
PStrain: an iterative microbial strains profiling algorithm for shotgun metagenomic sequencing data. Bioinform. 36(22-23): 5499-5506 (2021) - 2020
- [j42]Zicheng Zhao, Yingxiao Zhou, Shuai Wang, Xiuqing Zhang, Changfa Wang, Shuai Cheng Li:
LDscaff: LD-based scaffolding of de novo genome assemblies. BMC Bioinform. 21-S(21): 570 (2020) - [j41]Xikang Feng, Lingxi Chen, Zishuai Wang, Shuai Cheng Li:
I-Impute: a self-consistent method to impute single cell RNA sequencing data. BMC Genom. 21(S-10) (2020) - [j40]Wenlong Jia, Hechen Li, Shiying Li, Lingxi Chen, Shuai Cheng Li:
Oviz-Bio: a web-based platform for interactive cancer genomics data visualization. Nucleic Acids Res. 48(Webserver-Issue): W415-W426 (2020)
2010 – 2019
- 2019
- [j39]Lingxi Chen, Jiao Xu, Shuai Cheng Li:
DeepMF: deciphering the latent patterns in omics profiles with a deep learning method. BMC Bioinform. 20-S(23): 648 (2019) - [j38]Ruohan Wang, Zishuai Wang, Jianping Wang, Shuaicheng Li:
SpliceFinder: ab initio prediction of splice sites using convolutional neural network. BMC Bioinform. 20-S(23): 652 (2019) - [j37]Chen Li, Yiqi Jiang, Shuaicheng Li:
LEMON: a method to construct the local strains at horizontal gene transfer sites in gut metagenomics. BMC Bioinform. 20-S(23): 702 (2019) - [j36]Xikang Feng, Zishuai Wang, Hechen Li, Shuai Cheng Li:
MIRIA: a webserver for statistical, visual and meta-analysis of RNA editing data in mammals. BMC Bioinform. 20-S(24): 596 (2019) - [j35]Yilin Liu, Jiao Xu, Miaoxia Chen, Changfa Wang, Shuai Cheng Li:
A unified STR profiling system across multiple species with whole genome sequencing data. BMC Bioinform. 20-S(24): 671 (2019) - [j34]Yanlin Zhang, Weiwei Liu, Yu Lin, Yen Kaow Ng, Shuaicheng Li:
Large-scale 3D chromatin reconstruction from chromosomal contacts. BMC Genom. 20(S2) (2019) - [c26]Qi Niu, Shaoliang Peng, Xiang-Li-Lan Zhang, Shuai Cheng Li, Ying Xu, Xiang-Cheng Xie, Yi-Gang Tong:
LysoPhD: predicting functional prophages in bacterial genomes from high-throughput sequencing. BIBM 2019: 1-5 - 2018
- [j33]Zhoujian Xiao, Yuwei Zhang, Runsheng Yu, Yin Chen, Xiaosen Jiang, Ziwei Wang, Shuaicheng Li:
In silico design of MHC class I high binding affinity peptides through motifs activation map. BMC Bioinform. 19-S(19): 13-24 (2018) - [j32]Mengxuan Lyu, Jiaxing Chen, Yiqi Jiang, Wei Dong, Zhou Fang, Shuai Cheng Li:
KDiamend: a package for detecting key drivers in a molecular ecological network of disease. BMC Syst. Biol. 12(1): 89-99 (2018) - [j31]Joshua Chan Mun Wei, Zicheng Zhao, Shuai Cheng Li, Yen Kaow Ng:
NGS-based likelihood ratio for identifying contributors in two- and three-person DNA mixtures. Comput. Biol. Chem. 74: 428-433 (2018) - [j30]Lusheng Wang, Shuai Cheng Li, Yi-Ping Phoebe Chen:
Guest Editorial for the 15th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. 15(5): 1513-1514 (2018) - [c25]Yen Kaow Ng, Wenlong Jia, Shuai Cheng Li:
Placing Segments on Parallel Arcs. IWOCA 2018: 298-310 - 2017
- [j29]Jianwei Zhu, Haicang Zhang, Shuai Cheng Li, Chao Wang, Lupeng Kong, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu:
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts. Bioinform. 33(23): 3749-3757 (2017) - 2016
- [j28]Chao Wang, Haicang Zhang, Wei-Mou Zheng, Dong Xu, Jianwei Zhu, Bing Wang, Kang Ning, Shiwei Sun, Shuai Cheng Li, Dongbo Bu:
FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition. Bioinform. 32(3): 462-464 (2016) - [j27]Fei Guo, Yijie Ding, Shuai Cheng Li, Chao Shen, Lusheng Wang:
Protein-protein interface prediction based on hexagon structure similarity. Comput. Biol. Chem. 63: 83-88 (2016) - [c24]Zicheng Zhao, Yen Kaow Ng, Xiaodong Fang, Shuaicheng Li:
Eliminating heterozygosity from reads through coverage normalization. BIBM 2016: 174-177 - [c23]Bowen Tan, Zhe Zhang, Zicheng Zhao, Shengbin Li, Shuai Cheng Li:
Finding more effective microsatellite markers for forensics. BIBM 2016: 658-663 - [c22]Lu Zhang, Jiaxing Chen, Shuai Cheng Li:
More accurate models for detecting gene-gene interactions from public expression compendia. BIBM 2016: 1871-1878 - [i1]Dan Wang, Shuaicheng Li, Fei Guo, Lusheng Wang:
Core-genome scaffold comparison reveals the prevalence that inversion events are associated with pairs of inverted repeats. CoRR abs/1608.02375 (2016) - 2015
- [j26]Yen Kaow Ng, Linzhi Yin, Hirotaka Ono, Shuai Cheng Li:
Finding All Longest Common Segments in Protein Structures Efficiently. IEEE ACM Trans. Comput. Biol. Bioinform. 12(3): 644-655 (2015) - [j25]Dandan Song, Jiaxing Chen, Guang Chen, Ning Li, Jin Li, Jun Fan, Dongbo Bu, Shuai Cheng Li:
Parameterized BLOSUM Matrices for Protein Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 12(3): 686-694 (2015) - [c21]Xuefeng Cui, Hiroyuki Kuwahara, Shuai Cheng Li, Xin Gao:
Compare local pocket and global protein structure models by small structure patterns. BCB 2015: 355-365 - [c20]Lu Zhang, Yen Kaow Ng, Shuaicheng Li:
Reconstructing directed gene regulatory network by only gene expression data. BIBM 2015: 163-170 - [c19]Jin Li, Yen Kaow Ng, Xingwu Liu, Shuai Cheng Li:
On the Near-Linear Correlation of the Eigenvalues Across BLOSUM Matrices. ISBRA 2015: 199-210 - 2014
- [j24]Xuefeng Cui, Shuai Cheng Li, Lin He, Ming Li:
Fingerprinting protein structures effectively and efficiently. Bioinform. 30(7): 949-955 (2014) - [j23]Xiaowen Liu, Matthew W. Segar, Shuai Cheng Li, Sangtae Kim:
Spectral probabilities of top-down tandem mass spectra. BMC Genom. 15(S-1): S9 (2014) - [j22]Fei Guo, Shuai Cheng Li, Pufeng Du, Lusheng Wang:
Probabilistic Models for Capturing More Physicochemical Properties on Protein-Protein Interface. J. Chem. Inf. Model. 54(6): 1798-1809 (2014) - [j21]Ying Fan, Ruoshui Lu, Lusheng Wang, Massimo Andreatta, Shuai Cheng Li:
Quantifying Significance of MHC II Residues. IEEE ACM Trans. Comput. Biol. Bioinform. 11(1): 17-25 (2014) - [j20]Laleh Soltan Ghoraie, Forbes J. Burkowski, Shuai Cheng Li, Mu Zhu:
Residue-Specific Side-Chain Polymorphismsvia Particle Belief Propagation. IEEE ACM Trans. Comput. Biol. Bioinform. 11(1): 33-41 (2014) - 2013
- [j19]Shuai Cheng Li:
The Difficulty Of Protein Structure Alignment Under The RMSD. Algorithms Mol. Biol. 8: 1 (2013) - [j18]Xuefeng Cui, Shuai Cheng Li, Dongbo Bu, Babak Alipanahi, Ming Li:
Protein Structure Idealization: How accurately is it possible to model protein structures with dihedral angles? Algorithms Mol. Biol. 8: 5 (2013) - [j17]Daniel Holtby, Shuai Cheng Li, Ming Li:
LoopWeaver: Loop Modeling by the Weighted Scaling of Verified Proteins. J. Comput. Biol. 20(3): 212-223 (2013) - [j16]Fei Guo, Shuai Cheng Li, Wenji Ma, Lusheng Wang:
Detecting Protein Conformational Changes in Interactions via Scaling Known Structures. J. Comput. Biol. 20(10): 765-779 (2013) - [c18]Fei Guo, Shuai Cheng Li, Wenji Ma, Lusheng Wang:
Detecting Protein Conformational Changes in Interactions via Scaling Known Structures. RECOMB 2013: 58-74 - [c17]Xuefeng Cui, Shuai Cheng Li, Dongbo Bu, Ming Li:
Towards Reliable Automatic Protein Structure Alignment. WABI 2013: 18-32 - 2012
- [j15]Fei Guo, Shuai Cheng Li, Lusheng Wang, Daming Zhu:
Protein-protein binding site identification by enumerating the configurations. BMC Bioinform. 13: 158 (2012) - [j14]Shuai Cheng Li, Dongbo Bu, Ming Li:
Residues with Similar Hexagon Neighborhoods Share Similar Side-Chain Conformations. IEEE ACM Trans. Comput. Biol. Bioinform. 9(1): 240-248 (2012) - [j13]Shuai Cheng Li, Dongbo Bu, Ming Li:
Clustering 100, 000 Protein Structure Decoys in Minutes. IEEE ACM Trans. Comput. Biol. Bioinform. 9(3): 765-773 (2012) - [c16]Yen Kaow Ng, Hirotaka Ono, Ling Ge, Shuai Cheng Li:
Finding Longest Common Segments in Protein Structures in Nearly Linear Time. CPM 2012: 334-348 - [c15]Fei Guo, Shuai Cheng Li, Lusheng Wang:
P-Binder: A System for the Protein-Protein Binding Sites Identification. ISBRA 2012: 127-138 - [c14]Daniel Holtby, Shuai Cheng Li, Ming Li:
LoopWeaver - Loop Modeling by the Weighted Scaling of Verified Proteins. RECOMB 2012: 113-126 - [c13]Xuefeng Cui, Shuai Cheng Li, Dongbo Bu, Babak Alipanahi Ramandi, Ming Li:
How Accurately Can We Model Protein Structures with Dihedral Angles? WABI 2012: 274-287 - 2011
- [j12]Babak Alipanahi, Xin Gao, Emre Karakoç, Shuai Cheng Li, Frank J. Balbach, Guangyu Feng, Logan Donaldson, Ming Li:
Error Tolerant NMR Backbone Resonance Assignment and Automated Structure Generation. J. Bioinform. Comput. Biol. 9(1): 15-41 (2011) - [j11]Shuai Cheng Li, Dongbo Bu, Jinbo Xu, Ming Li:
Finding Nearly Optimal GDT Scores. J. Comput. Biol. 18(5): 693-704 (2011) - [j10]Bonnie Kirkpatrick, Shuai Cheng Li, Richard M. Karp, Eran Halperin:
Pedigree Reconstruction Using Identity by Descent. J. Comput. Biol. 18(11): 1481-1493 (2011) - [j9]Fei Guo, Shuai Cheng Li, Lusheng Wang:
Protein-Protein Binding Sites Prediction by 3D Structural Similarities. J. Chem. Inf. Model. 51(12): 3287-3294 (2011) - [j8]Shuai Cheng Li, Yen Kaow Ng:
On protein structure alignment under distance constraint. Theor. Comput. Sci. 412(32): 4187-4199 (2011) - [c12]Bonnie Kirkpatrick, Shuai Cheng Li, Richard M. Karp, Eran Halperin:
Pedigree Reconstruction Using Identity by Descent. RECOMB 2011: 136-152 - 2010
- [j7]Shuai Cheng Li, Yen Kaow Ng:
Calibur: a tool for clustering large numbers of protein decoys. BMC Bioinform. 11: 25 (2010) - [j6]Yuzhong Zhao, Babak Alipanahi, Shuai Cheng Li, Ming Li:
Protein Secondary Structure Prediction Using NMR Chemical Shift Data. J. Bioinform. Comput. Biol. 8(5): 867-884 (2010)
2000 – 2009
- 2009
- [j5]Xin Gao, Jinbo Xu, Shuai Cheng Li, Ming Li:
Predicting Local Quality of a Sequence-Structure Alignment. J. Bioinform. Comput. Biol. 7(5): 789-810 (2009) - [j4]Shuai Cheng Li, Ming Li:
On two open problems of 2-interval patterns. Theor. Comput. Sci. 410(24-25): 2410-2423 (2009) - [j3]Dongbo Bu, Ming Li, Shuai Cheng Li, Jianbo Qian, Jinbo Xu:
Finding compact structural motifs. Theor. Comput. Sci. 410(30-32): 2834-2839 (2009) - [c11]Shuai Cheng Li, Yen Kaow Ng:
On Protein Structure Alignment under Distance Constraint. ISAAC 2009: 65-76 - 2008
- [j2]Shuai Cheng Li, Yen Kaow Ng, Louxin Zhang:
A PTAS For The k-Consensus Structures Problem Under Squared Euclidean Distance. Algorithms 1(2): 43-51 (2008) - [c10]Shuai Cheng Li, Dongbo Bu, Jinbo Xu, Ming Li:
Finding Largest Well-Predicted Subset of Protein Structure Models. CPM 2008: 44-55 - [c9]Shuai Cheng Li, Yen Kaow Ng, Louxin Zhang:
A PTAS for the k-Consensus Structures Problem Under Euclidean Squared Distance. FAW 2008: 35-44 - [c8]Shuai Cheng Li, Dongbo Bu, Xin Gao, Jinbo Xu, Ming Li:
Designing succinct structural alphabets. ISMB 2008: 182-189 - 2007
- [c7]Jianbo Qian, Shuai Cheng Li, Dongbo Bu, Ming Li, Jinbo Xu:
Finding Compact Structural Motifs. CPM 2007: 142-149 - [c6]Xin Gao, Shuaicheng Li, Yinan Lu:
New Algorithms for the Spaced Seeds. FAW 2007: 50-61 - 2006
- [c5]Shuai Cheng Li:
Faster Algorithms for Finding Missing Patterns. CATS 2006: 107-111 - [c4]Shuai Cheng Li, Ming Li:
On the Complexity of the Crossing Contact Map Pattern Matching Problem. WABI 2006: 231-241 - 2005
- [c3]Xia Cao, Shuai Cheng Li, Anthony K. H. Tung:
Indexing DNA Sequences Using q-Grams. DASFAA 2005: 4-16 - 2004
- [j1]Xia Cao, Shuai Cheng Li, Beng Chin Ooi, Anthony K. H. Tung:
Piers: An Efficient Model for Similarity Search in DNA Sequence Databases. SIGMOD Rec. 33(2): 39-44 (2004) - [c2]Shuai Cheng Li, Hon Wai Leong, Steven K. Quek:
New Approximation Algorithms for Some Dynamic Storage Allocation Problems. COCOON 2004: 339-348 - [c1]Xia Cao, Anthony K. H. Tung, Beng Chin Ooi, Kian-Lee Tan, Shuai Cheng Li:
String Join Using Precedence Count Matrix. SSDBM 2004: 345-348
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-07-24 20:44 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
