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ORCIDWeihua Li 0005
Person information
- affiliation: East China University of Science and Technology, School of Pharmacy, Shanghai, China
Other persons with the same name
- Weihua Li (aka: Wei-Hua Li, Wei-hua Li, Wei Hua Li) — disambiguation page
- Weihua Li 0001
![[0000-0002-6190-8421]](https://dblp.dagstuhl.de/img/orcid-mark.12x12.png "0000-0002-6190-8421")
— University of Wollongong, Faculty of Engineering and Information Sciences - Weihua Li 0002 — University of Electronic Science and Technology of China, Chengdu, China
- WeiHua James Li (aka: Weihua Li 0003) — MIT, Media Lab, Cambridge, MA, USA
- Weihua Li 0004 — South China University of Technology, School of Mechanical and Automotive Engineering, Guangzhou, China (and 1 more)
- Weihua Li 0006 — Yunnan University, School of Information Science and Engineering, Kunming, China
- Weihua Li 0007 — Auckland University of Technology, School of Engineering, Computer and Mathematical Sciences, New Zealand
- Weihua Li 0008 — Harbin Institute of Technology, School of Automotive Engineering, Weihai, China (and 1 more)
- Weihua Li 0009 — Northeastern University, College of Information Science and Engineering, Shenyang, Liaoning, China
- Weihua Li 0010 — Tongji University, School of Surveying Mapping and Geographic Information, Shanghai, China (and 1 more)
- Weihua Li 0011 — Air Force Engineering University, Institute Information and Navigation, Xi'an, China
- Weihua Li 0012 — University of Alberta, Department of Chemical and Materials Engineering, Edmonton, Canada (and 1 more)
- Weihua Li 0013 — Guangdong University of Technology, School of Computer Science and Technology, Key Laboratory of Innovation Method and Decision Management System of Guangdong Province, Guangzhou, China
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2020 – today
- 2024
[j52]Keyun Zhu, Mengting Huang, Yimeng Wang, Yaxin Gu, Weihua Li, Guixia Liu, Yun Tang:
MetaPredictor: in silico prediction of drug metabolites based on deep language models with prompt engineering. Briefings Bioinform. 25(5) (2024)- [j51]Yimeng Wang, Xinxin Yu, Yaxin Gu, Weihua Li, Keyun Zhu, Long Chen, Yun Tang, Guixia Liu:
XGraphCDS: An explainable deep learning model for predicting drug sensitivity from gene pathways and chemical structures. Comput. Biol. Medicine 168: 107746 (2024) - [j50]Zhuohang Yu, Zengrui Wu, Moran Zhou, Long Chen, Weihua Li, Guixia Liu, Yun Tang:
mtADENet: A novel interpretable method integrating multiple types of network-based inference approaches for prediction of adverse drug events. Comput. Biol. Medicine 168: 107831 (2024) - [j49]Yaxin Gu, Yimeng Wang, Keyun Zhu, Weihua Li, Guixia Liu, Yun Tang:
DBPP-Predictor: a novel strategy for prediction of chemical drug-likeness based on property profiles. J. Cheminformatics 16(1): 4 (2024) - [j48]Zhuohang Yu, Zengrui Wu, Ze Wang, Yimeng Wang, Moran Zhou, Weihua Li, Guixia Liu, Yun Tang:
Network-Based Methods and Their Applications in Drug Discovery. J. Chem. Inf. Model. 64(1): 57-75 (2024) - [j47]Yanjun Feng, Changda Gong, Jieyu Zhu, Guixia Liu, Yun Tang, Weihua Li:
Unraveling the Ligand-Binding Sites of CYP3A4 by Molecular Dynamics Simulations with Solvent Probes. J. Chem. Inf. Model. 64(8): 3451-3464 (2024) - 2023
- [j46]Yimeng Wang, Mengting Huang, Hua Deng, Weihua Li, Zengrui Wu, Yun Tang, Guixia Liu:
Identification of vital chemical information via visualization of graph neural networks. Briefings Bioinform. 24(1) (2023) - [j45]Hua Deng, Meng Ding, Yimeng Wang, Weihua Li, Guixia Liu, Yun Tang:
ACP-MLC: A two-level prediction engine for identification of anticancer peptides and multi-label classification of their functional types. Comput. Biol. Medicine 158: 106844 (2023) - [j44]Chaofeng Lou, Hongbin Yang, Hua Deng, Mengting Huang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Chemical rules for optimization of chemical mutagenicity via matched molecular pairs analysis and machine learning methods. J. Cheminformatics 15(1): 35 (2023) - [j43]Moran Zhou, Jiamin Sun, Zhuohang Yu, Zengrui Wu, Weihua Li, Guixia Liu, Lei Ma, Rui Wang, Yun Tang:
Investigation of Anti-Alzheimer's Mechanisms of Sarsasapogenin Derivatives by Network-Based Combining Structure-Based Methods. J. Chem. Inf. Model. 63(9): 2881-2894 (2023) - [j42]Yanjun Feng, Changda Gong, Jieyu Zhu, Guixia Liu, Yun Tang, Weihua Li:
Prediction of Sites of Metabolism of CYP3A4 Substrates Utilizing Docking-Derived Geometric Features. J. Chem. Inf. Model. 63(13): 4158-4169 (2023) - [j41]Lulu Zheng, Bin Zhu, Zengrui Wu, Mei Guo, Jinyao Chen, Minghuang Hong, Guixia Liu, Weihua Li, Guobin Ren, Yun Tang:
Pharmaceutical Cocrystal Discovery via 3D-SMINBR: A New Network Recommendation Tool Augmented by 3D Molecular Conformations. J. Chem. Inf. Model. 63(14): 4301-4311 (2023) - 2022
- [j40]Zhuohang Yu, Zengrui Wu, Weihua Li, Guixia Liu, Yun Tang:
ADENet: a novel network-based inference method for prediction of drug adverse events. Briefings Bioinform. 23(2) (2022) - [j39]Jiye Wang, Chaofeng Lou, Guixia Liu, Weihua Li, Zengrui Wu, Yun Tang:
Profiling prediction of nuclear receptor modulators with multi-task deep learning methods: toward the virtual screening. Briefings Bioinform. 23(5) (2022) - [j38]Yimeng Wang, Yaxin Gu, Chaofeng Lou, Yuning Gong, Zengrui Wu, Weihua Li, Yun Tang, Guixia Liu:
A multitask GNN-based interpretable model for discovery of selective JAK inhibitors. J. Cheminformatics 14(1): 16 (2022) - [j37]Mengting Huang, Chaofeng Lou, Zengrui Wu, Weihua Li, Philip W. Lee, Yun Tang, Guixia Liu:
In silico prediction of UGT-mediated metabolism in drug-like molecules via graph neural network. J. Cheminformatics 14(1): 46 (2022) - [j36]Dongping Li, Kexin Jiang, Dan Teng, Zengrui Wu, Weihua Li, Yun Tang, Rui Wang, Guixia Liu:
Discovery of New Estrogen-Related Receptor α Agonists via a Combination Strategy Based on Shape Screening and Ensemble Docking. J. Chem. Inf. Model. 62(3): 486-497 (2022) - [j35]Chaofeng Lou, Hongbin Yang, Jiye Wang, Mengting Huang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
IDL-PPBopt: A Strategy for Prediction and Optimization of Human Plasma Protein Binding of Compounds via an Interpretable Deep Learning Method. J. Chem. Inf. Model. 62(11): 2788-2799 (2022) - 2021
- [j34]Yayuan Peng, Manjiong Wang, Yixiang Xu, Zengrui Wu, Jiye Wang, Chao Zhang, Guixia Liu, Weihua Li, Jian Li, Yun Tang:
Drug repositioning by prediction of drug's anatomical therapeutic chemical code via network-based inference approaches. Briefings Bioinform. 22(2): 2058-2072 (2021) - [j33]Zhuohang Yu, Zengrui Wu, Weihua Li, Guixia Liu, Yun Tang:
MetaADEDB 2.0: a comprehensive database on adverse drug events. Bioinform. 37(15): 2221-2222 (2021) - [j32]Junhao Li, Yue Chen, Yun Tang, Weihua Li, Yaoquan Tu:
Homotropic Cooperativity of Midazolam Metabolism by Cytochrome P450 3A4: Insight from Computational Studies. J. Chem. Inf. Model. 61(5): 2418-2426 (2021) - [j31]Jiye Wang, Zengrui Wu, Yayuan Peng, Weihua Li, Guixia Liu, Yun Tang:
Pathway-Based Drug Repurposing with DPNetinfer: A Method to Predict Drug-Pathway Associations via Network-Based Approaches. J. Chem. Inf. Model. 61(5): 2475-2485 (2021) - [j30]Zengrui Wu, Qiaohui Wang, Hongbin Yang, Jiye Wang, Weihua Li, Guixia Liu, Yi Yang, Yuzheng Zhao, Yun Tang:
Discovery of Natural Products Targeting NQO1 via an Approach Combining Network-Based Inference and Identification of Privileged Substructures. J. Chem. Inf. Model. 61(5): 2486-2498 (2021) - [j29]Lulu Zheng, Bin Zhu, Zengrui Wu, Fang Liang, Minghuang Hong, Guixia Liu, Weihua Li, Guobin Ren, Yun Tang:
SMINBR: An Integrated Network and Chemoinformatics Tool Specialized for Prediction of Two-Component Crystal Formation. J. Chem. Inf. Model. 61(9): 4290-4302 (2021) - 2020
- [j28]Yue Chen, Junhao Li, Zengrui Wu, Guixia Liu, Honglin Li, Yun Tang, Weihua Li:
Computational Insight into the Allosteric Activation Mechanism of Farnesoid X Receptor. J. Chem. Inf. Model. 60(3): 1540-1550 (2020) - [j27]Dan Teng, Jianhui Chen, Dongping Li, Zengrui Wu, Weihua Li, Yun Tang, Guixia Liu:
Computational Insights into Molecular Activation and Positive Cooperative Mechanisms of FFAR1 Modulators. J. Chem. Inf. Model. 60(6): 3214-3230 (2020) - [j26]Zengrui Wu, Yayuan Peng, Zhuohang Yu, Weihua Li, Guixia Liu, Yun Tang:
NetInfer: A Web Server for Prediction of Targets and Therapeutic and Adverse Effects via Network-Based Inference Methods. J. Chem. Inf. Model. 60(8): 3687-3691 (2020) - [j25]Junhao Li, Yang Zhou, Yun Tang, Weihua Li, Yaoquan Tu:
Dissecting the Structural Plasticity and Dynamics of Cytochrome P450 2B4 by Molecular Dynamics Simulations. J. Chem. Inf. Model. 60(10): 5026-5035 (2020)
2010 – 2019
- 2019
- [j24]Hongbin Yang, Chaofeng Lou, Lixia Sun, Jie Li, Yingchun Cai, Zhuang Wang, Weihua Li, Guixia Liu, Yun Tang:
admetSAR 2.0: web-service for prediction and optimization of chemical ADMET properties. Bioinform. 35(6): 1067-1069 (2019) - [j23]Lixia Sun, Hongbin Yang, Yingchun Cai, Weihua Li, Guixia Liu, Yun Tang:
In Silico Prediction of Endocrine Disrupting Chemicals Using Single-Label and Multilabel Models. J. Chem. Inf. Model. 59(3): 973-982 (2019) - [j22]Yingchun Cai, Hongbin Yang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Computational Prediction of Site of Metabolism for UGT-Catalyzed Reactions. J. Chem. Inf. Model. 59(3): 1085-1095 (2019) - [j21]Feixiong Cheng, Weihua Li, Yadi Zhou, Jie Shen, Zengrui Wu, Guixia Liu, Philip W. Lee, Yun Tang:
Correction to "admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties". J. Chem. Inf. Model. 59(11): 4959 (2019) - [j20]Xinzhe Xiao, Zehui Chen, Zengrui Wu, Tianduanyi Wang, Weihua Li, Guixia Liu, Bo Zhang, Yun Tang:
Insights into the antineoplastic mechanism of Chelidonium majus via systems pharmacology approach. Quant. Biol. 7(1): 42-53 (2019) - 2018
- [j19]Yingchun Cai, Hongbin Yang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Multiclassification Prediction of Enzymatic Reactions for Oxidoreductases and Hydrolases Using Reaction Fingerprints and Machine Learning Methods. J. Chem. Inf. Model. 58(6): 1169-1181 (2018) - [j18]Hongbin Yang, Lixia Sun, Zhuang Wang, Weihua Li, Guixia Liu, Yun Tang:
ADMETopt: A Web Server for ADMET Optimization in Drug Design via Scaffold Hopping. J. Chem. Inf. Model. 58(10): 2051-2056 (2018) - 2017
- [j17]Zengrui Wu, Feixiong Cheng, Jie Li, Weihua Li, Guixia Liu, Yun Tang:
SDTNBI: an integrated network and chemoinformatics tool for systematic prediction of drug-target interactions and drug repositioning. Briefings Bioinform. 18(2): 333-347 (2017) - [j16]Hanwen Du, Junhao Li, Yingchun Cai, Hongxiao Zhang, Guixia Liu, Yun Tang, Weihua Li:
Computational Investigation of Ligand Binding to the Peripheral Site in CYP3A4: Conformational Dynamics and Inhibitor Discovery. J. Chem. Inf. Model. 57(3): 616-626 (2017) - 2014
- [j15]Xiao Li, Lei Chen, Feixiong Cheng, Zengrui Wu, Hanping Bian, Congying Xu, Weihua Li, Guixia Liu, Xu Shen, Yun Tang:
In Silico Prediction of Chemical Acute Oral Toxicity Using Multi-Classification Methods. J. Chem. Inf. Model. 54(4): 1061-1069 (2014) - 2013
- [j14]Feixiong Cheng, Weihua Li, Xichuan Wang, Yadi Zhou, Zengrui Wu, Jie Shen, Yun Tang:
Adverse Drug Events: Database Construction and in Silico Prediction. J. Chem. Inf. Model. 53(4): 744-752 (2013) - [j13]Feixiong Cheng, Weihua Li, Zengrui Wu, Xichuan Wang, Chen Zhang, Jie Li, Guixia Liu, Yun Tang:
Prediction of Polypharmacological Profiles of Drugs by the Integration of Chemical, Side Effect, and Therapeutic Space. J. Chem. Inf. Model. 53(4): 753-762 (2013) - [j12]Ting Shi, Yuhui Han, Weihua Li, Yanlong Zhao, Yaqin Liu, Zhimin Huang, Shaoyong Lu, Jian Zhang:
Exploring the Desumoylation Process of SENP1: A Study Combined MD Simulations with QM/MM Calculations on SENP1-SUMO1-RanGAP1. J. Chem. Inf. Model. 53(9): 2360-2368 (2013) - 2012
- [j11]Feixiong Cheng, Yutaka Ikenaga, Yadi Zhou, Yue Yu, Weihua Li, Jie Shen, Zheng Du, Lei Chen, Congying Xu, Guixia Liu, Philip W. Lee, Yun Tang:
In Silico Assessment of Chemical Biodegradability. J. Chem. Inf. Model. 52(3): 655-669 (2012) - [j10]Guoping Hu, Guanglin Kuang, Wen Xiao, Weihua Li, Guixia Liu, Yun Tang:
Performance Evaluation of 2D Fingerprint and 3D Shape Similarity Methods in Virtual Screening. J. Chem. Inf. Model. 52(5): 1103-1113 (2012) - [j9]Congying Xu, Feixiong Cheng, Lei Chen, Zheng Du, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
In silico Prediction of Chemical Ames Mutagenicity. J. Chem. Inf. Model. 52(11): 2840-2847 (2012) - [j8]Weihua Li, Jing Fu, Feixiong Cheng, Mingyue Zheng, Jian Zhang, Guixia Liu, Yun Tang:
Unbinding Pathways of GW4064 from Human Farnesoid X Receptor As Revealed by Molecular Dynamics Simulations. J. Chem. Inf. Model. 52(11): 3043-3052 (2012) - [j7]Feixiong Cheng, Weihua Li, Yadi Zhou, Jie Shen, Zengrui Wu, Guixia Liu, Philip W. Lee, Yun Tang:
admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties. J. Chem. Inf. Model. 52(11): 3099-3105 (2012) - [j6]Feixiong Cheng, Chuang Liu, Jing Jiang, Weiqiang Lu, Weihua Li, Guixia Liu, Wei-Xing Zhou, Jin Huang, Yun Tang:
Prediction of Drug-Target Interactions and Drug Repositioning via Network-Based Inference. PLoS Comput. Biol. 8(5) (2012) - 2011
- [j5]Feixiong Cheng, Yue Yu, Jie Shen, Lei Yang, Weihua Li, Guixia Liu, Philip W. Lee, Yun Tang:
Classification of Cytochrome P450 Inhibitors and Noninhibitors Using Combined Classifiers. J. Chem. Inf. Model. 51(5): 996-1011 (2011) - [j4]Feixiong Cheng, Yue Yu, Yadi Zhou, Zhonghua Shen, Wen Xiao, Guixia Liu, Weihua Li, Philip W. Lee, Yun Tang:
Insights into Molecular Basis of Cytochrome P450 Inhibitory Promiscuity of Compounds. J. Chem. Inf. Model. 51(10): 2482-2495 (2011) - [j3]Zhimin Huang, Liang Zhu, Yan Cao, Geng Wu, Xinyi Liu, Yingyi Chen, Qi Wang, Ting Shi, Yaxue Zhao, Yuefei Wang, Weihua Li, Yixue Li, Haifeng Chen, Guoqiang Chen, Jian Zhang:
ASD: a comprehensive database of allosteric proteins and modulators. Nucleic Acids Res. 39(Database-Issue): 663-669 (2011) - 2010
- [j2]Jie Shen, Feixiong Cheng, You Xu, Weihua Li, Yun Tang:
Estimation of ADME Properties with Substructure Pattern Recognition. J. Chem. Inf. Model. 50(6): 1034-1041 (2010) - [j1]Yaozong Li, Jie Shen, Xianqiang Sun, Weihua Li, Guixia Liu, Yun Tang:
Accuracy Assessment of Protein-Based Docking Programs against RNA Targets. J. Chem. Inf. Model. 50(6): 1134-1146 (2010)
Coauthor Index
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