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ORCIDMichael G. Katze
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2010 – 2019
- 2016
[j12]Jason E. McDermott
, Hugh D. Mitchell, Lisa E. Gralinski, Amie J. Eisfeld, Laurence Josset, Armand Bankhead III, Gabriele Neumann, Susan C. Tilton, Alexandra Schäfer, Chengjun Li, Shufang Fan, Shannon K. McWeeney, Ralph S. Baric, Michael G. Katze, Katrina M. Waters:
The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus. BMC Syst. Biol. 10: 93 (2016)- 2015
- [j11]Xinxia Peng, Jean Thierry-Mieg, Danielle Thierry-Mieg, Andrew Nishida, Lenore Pipes, Marjan Bozinoski, Matthew J. Thomas, Sara Kelly, Jeffrey M. Weiss, Muthuswamy Raveendran, Donna M. Muzny, Richard A. Gibbs, Jeffrey Rogers, Gary P. Schroth, Michael G. Katze, Christopher E. Mason:
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). Nucleic Acids Res. 43(Database-Issue): 737-742 (2015) - 2014
- [j10]M. Brian Couger, Lenore Pipes, Fabio Squina, Rolf Prade, Adam C. Siepel, Robert Palermo, Michael G. Katze, Christopher E. Mason, Philip D. Blood:
Enabling large-scale next-generation sequence assembly with Blacklight. Concurr. Comput. Pract. Exp. 26(13): 2157-2166 (2014) - 2013
- [j9]Nicolas Tchitchek, Amie J. Eisfeld, Jennifer Tisoncik-Go, Laurence Josset, Lisa E. Gralinski, Christophe Bécavin, Susan C. Tilton, Bobbie-Jo M. Webb-Robertson, Martin T. Ferris, Allison L. Totura, Chengjun Li, Gabriele Neumann, Thomas O. Metz, Richard D. Smith, Katrina M. Waters, Ralph S. Baric, Yoshihiro Kawaoka, Michael G. Katze:
Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice. BMC Syst. Biol. 7: 69 (2013) - [j8]David L. Gibbs, Arie Baratt, Ralph S. Baric, Yoshihiro Kawaoka, Richard D. Smith, Eric S. Orwoll, Michael G. Katze, Shannon K. McWeeney:
Protein co-expression network analysis (ProCoNA). J. Clin. Bioinform. 3: 11 (2013) - [j7]Lenore Pipes, Sheng Li, Marjan Bozinoski, Robert Palermo, Xinxia Peng, Philip D. Blood, Sara Kelly, Jeffrey M. Weiss, Jean Thierry-Mieg, Danielle Thierry-Mieg, Paul Zumbo, Ronghua Chen, Gary P. Schroth, Christopher E. Mason, Michael G. Katze:
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics. Nucleic Acids Res. 41(Database-Issue): 906-914 (2013) - 2012
- [j6]Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze:
A new approach to bias correction in RNA-Seq. Bioinform. 28(7): 921-928 (2012) - [j5]Jason E. McDermott, Deborah L. Diamond, Courtney D. Corley, Angela L. Rasmussen, Michael G. Katze, Katrina M. Waters:
Topological analysis of protein co-abundance networks identifies novel host targets important for HCV infection and pathogenesis. BMC Syst. Biol. 6: 28 (2012) - [c1]T. M. Murali, Matthew D. Dyer, David Badger, Brett M. Tyler, Michael G. Katze:
Network-Based Prediction and Analysis of HIV Dependency Factors. RECOMB 2012: 183 - [i1]Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze:
Compression of next-generation sequencing reads aided by highly efficient de novo assembly. CoRR abs/1207.2424 (2012) - 2011
- [j4]Jason E. McDermott, Harish Shankaran, Amie J. Eisfeld, Sarah E. Belisle, Gabriele Neumann, Chengjun Li, Shannon K. McWeeney, Carol Sabourin, Yoshihiro Kawaoka, Michael G. Katze, Katrina M. Waters:
Conserved host response to highly pathogenic avian influenza virus infection in human cell culture, mouse and macaque model systems. BMC Syst. Biol. 5: 190 (2011) - [j3]Stewart T. Chang, Nicolas Tchitchek, Debashis Ghosh, Arndt Benecke, Michael G. Katze:
A chemokine gene expression signature derived from meta-analysis predicts the pathogenicity of viral respiratory infections. BMC Syst. Biol. 5: 202 (2011) - [j2]T. M. Murali, Matthew D. Dyer, David Badger, Brett M. Tyler, Michael G. Katze:
Network-Based Prediction and Analysis of HIV Dependency Factors. PLoS Comput. Biol. 7(9) (2011)
2000 – 2009
- 2008
- [j1]Ivan Borozan, Limin Chen, Bryan Paeper, Jenny E. Heathcote, Aled M. Edwards, Michael G. Katze, Zhaolei Zhang, Ian D. McGilvray:
MAID : An effect size based model for microarray data integration across laboratories and platforms. BMC Bioinform. 9 (2008)
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