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16th BIOSTEC BIOINFORMATICS 2023: Lisbon, Portugal
- Hesham Ali, Ning Deng, Ana Fred, Hugo Gamboa:
Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2023, Volume 3: BIOINFORMATICS, Lisbon, Portugal, February 16-18, 2023. SCITEPRESS 2023, ISBN 978-989-758-631-6
Invited Speakers
- Giovanni Saggio:
Towards the Virtual Human Simulator. 5-12 - Elazer Edelman:
Academia and Industry: Partners in Leveraging Engineering, Science and Medicine for Clinical Translation. BIOSTEC 2023: 13 - Mireille Hildebrandt
:
Ground-Truthing in the European Health Data Space. 15-22 - Riccardo Bellazzi:
Machine Learning Applied to Electronic Health Record Data: Opportunities and Challenges. BIOSTEC 2023: 23-24
Papers
- Honglu Sun, Jean-Paul Comet, Maxime Folschette, Morgan Magnin:
Condition for Sustained Oscillations in Repressilator Based on a Hybrid Modeling of Gene Regulatory Networks. 29-40 - Marina Oliveira, Hélder Araújo
:
Local Forward-Motion Panoramic Views for Localization and Lesion Detection for Multi-Camera Wireless Capsule Endoscopy Videos. 41-50 - Qiyuan Wu, Vincent Cleveland, Seda Aslan, Xiaolong Liu, Jacqueline Contento, Paige Mass, Byeol Kim, Catherine Pollard, Pranava Sinha, Yue-Hin Loke, Laura Olivieri, Axel Krieger:
Hemodynamics of Convergent Cavopulmonary Connection with Ventricular Assist Device for Fontan Surgery: A Computational and Experimental Study. BIOINFORMATICS 2023: 51-58 - Katrin Sophie Bohnsack, Alexander Engelsberger, Marika Kaden, Thomas Villmann:
Efficient Representation of Biochemical Structures for Supervised and Unsupervised Machine Learning Models Using Multi-Sensoric Embeddings. 59-69 - Njagi Moses Mwaniki, Erik Garrison, Nadia Pisanti:
Fast Exact String to D-Texts Alignments. 70-79 - Pratik Devkota, Somya D. Mohanty, Prashanti Manda:
Ontology-Powered Boosting for Improved Recognition of Ontology Concepts from Biological Literature. 80-90 - Anwar Jimi, Hind Abouche, Nabila Zrira, Ibtissam Benmiloud:
Skin Lesion Segmentation Using Attention-Based DenseUNet. 91-100 - Jonathan Tang, McClain Kressman, Harsha Lakshmankumar, Belle Aduaka, Ava Jakusovszky, Paul Anderson, Jean Davidson:
PUMP: An Underspecification Analysis Tool. 101-108 - Sofia P. Agostinho, Joaquim M. S. Cabral
, Ana Fred, Carlos A. V. Rodrigues:
Unsupervised Cardiac Differentiation Stage Portraying and Pseudotime Mapping Based on Gene Expression Data. 109-120 - Aditi R. Durge, Deepti D. Shrimankar:
MRQPMS: Design of a Map Reduce Bioinspired Model for Solving Quorum Planted Motif Search for High-Speed Deployments. 123-130 - Luis García-Terriza, José L. Risco-Martín, José L. Ayala, Gemma Reig Roselló:
Intelligence-Based Recommendation System for Critical Stroke Management in Intensive Care Units. 131-138 - Keiji Yasuda, Miyuki Nakamura
, Masatoshi Nagata, Masaru Honjo:
Building a DNA Methylation Aging Clock Model on Less Labelled Data Using Item Response Theory. 139-145 - Elisabetta De Maria, Benjamin Lapijover, Thibaud L'Yvonnet, Sabine Moisan, Jean-Paul Rigault:
A Formal Probabilistic Model of the Inhibitory Control Circuit in the Brain. 146-154 - Eleonora Mian, Enrico Petrucci, Cinzia Pizzi, Matteo Comin:
Efficient Hashing of Multiple Spaced Seeds with Application. 155-162 - Takehide Soh, Morgan Magnin, Daniel Le Berre, Mutsunori Banbara, Naoyuki Tamura:
SAT-Based Method for Finding Attractors in Asynchronous Multi-Valued Networks. 163-174 - Ahtisham Fazeel
, Areeb Agha, Andreas Dengel, Sheraz Ahmed:
NP-BERT: A Two-Staged BERT Based Nucleosome Positioning Prediction Architecture for Multiple Species. 175-187 - Ümmü Gülsüm Söylemez, Malik Yousef, Burcu Bakir-Gungor:
Prediction of Antimicrobial Peptides Using Deep Neural Networks. 188-194 - Emma Qumsiyeh, Miray Unlu Yazici
, Malik Yousef:
GediNETPro: Discovering Patterns of Disease Groups. 195-203 - Domonkos Pogány
, Péter Antal:
DT-ML: Drug-Target Metric Learning. 204-211 - Aleksandr Koshkarov, Nadia Tahiri:
GPTree: Generator of Phylogenetic Trees with Overlapping and Biological Events for Supertree Inference. 212-219 - Andrzej Swierniak, Emilia Kozlowska, Krzysztof Fujarewicz, Damian Borys, Agata Wilk, Jaroslaw Smieja, Rafal Suwinski:
System Modeling and Machine Learning in Prediction of Metastases in Lung Cancer. 220-227 - Jessica Gliozzo
, Alex Patak, Antonio Puertas Gallardo, Elena Casiraghi
, Giorgio Valentini:
Patient Similarity Networks Integration for Partial Multimodal Datasets. 228-234 - Krishnendu Ghosh, Julia Goldman:
Formal Analysis of Rewriting System Representing RNA Folding. 235-242 - Valentina Guarino, Jessica Gliozzo
, Ferdinando Clarelli, Béatrice Pignolet, Kaalindi Misra, Elisabetta Mascia, Giordano Antonino, Silvia Santoro, Laura Ferré, Miryam Cannizzaro, Melissa Sorosina, Roland Liblau, Massimo Filippi, Ettore Mosca, Federica Esposito, Giorgio Valentini, Elena Casiraghi
:
Intrinsic-Dimension Analysis for Guiding Dimensionality Reduction in Multi-Omics Data. 243-251 - Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil:
MOT: A Multi-Omics Transformer for Multiclass Classification Tumour Types Predictions. 252-261 - A. Yvan Guifo Fodjo, Jerry Lacmou Zeutouo, Samuel Bowong:
Separation of Concerns in an Edge-Based Compartmental Modeling Framework. 262-269 - Jing Hu, Yihang Du:
Predicting Moonlighting Proteins from Protein Sequence. 270-275 - Jack Fraser-Govil, Zemin Ning:
Ongoing Work to Study the Underlying Statistical Patterns of Oesophageal Chromothripsis. 276-283 - Alzbeta Bugánová, Ivan Cimrák:
Computational Study of Particle Separation Based on Inertial Effects in Rectangular Serpentine Channels with Different Aspect Ratios. 284-291 - Dominika Petríková, Ivan Cimrák, Katarína Tobiásová, Lukás Plank:
Semi-Automated Workflow for Computer-Generated Scoring of Ki67 Positive Cells from HE Stained Slides. 292-300 - Tommy Dang:
GenExViz: Effective Visualizations of Bioinformatics Data - An Analysis Studies on Cancer Prevention. 301-308

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