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ORCIDRECOMB-CG 2018: Magog-Orford, QC, Canada
- Mathieu Blanchette, Aïda Ouangraoua:
Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings. Lecture Notes in Computer Science 11183, Springer 2018, ISBN 978-3-030-00833-8
Genome Rearrangements
- Leonid Chindelevitch
, Joao Meidanis:
A Cubic Algorithm for the Generalized Rank Median of Three Genomes. 3-27 - Aniket C. Mane, Manuel Lafond, Pedro Feijão, Cédric Chauve:
The Rooted SCJ Median with Single Gene Duplications. 28-48 - Pijus Simonaitis, Annie Chateau, Krister M. Swenson:
A General Framework for Genome Rearrangement with Biological Constraints. 49-71 - Alexey Zabelkin, Nikita Alexeev:
Estimation of the True Evolutionary Distance Under the INFER Model. 72-87
Genome Sequencing
- Tom Davot, Annie Chateau, Rodolphe Giroudeau, Mathias Weller:
On the Hardness of Approximating Linearization of Scaffolds Sharing Repeated Contigs. 91-107 - Xian Fan, Jie Xu, Luay Nakhleh:
Detecting Large Indels Using Optical Map Data. 108-127
Applied Comparative Genomics
- Md. Abid Hasan, Stefano Lonardi:
mClass: Cancer Type Classification with Somatic Point Mutation Data. 131-145 - Yue Zhang, Chunfang Zheng, David Sankoff:
Speciation and Rate Variation in a Birth-and-Death Account of WGD and Fractionation; the Case of Solanaceae. 146-160
Reconciliation and Coalescence
- Cédric Chauve, Jingxue Feng, Liangliang Wang:
Detecting Introgression in Anopheles Mosquito Genomes Using a Reconciliation-Based Approach. 163-178 - Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos:
Reconstructing the History of Syntenies Through Super-Reconciliation. 179-195 - Sébastien Roch:
On the Variance of Internode Distance Under the Multispecies Coalescent. 196-206
Phylogenetics
- Mukul S. Bansal:
Linear-Time Algorithms for Some Phylogenetic Tree Completion Problems Under Robinson-Foulds Distance. 209-226 - Thomas Dencker, Chris-André Leimeister, Michael Gerth, Christoph Bleidorn, Sagi Snir, Burkhard Morgenstern:
Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees. 227-241 - Hussein A. Hejase, Natalie Vande Pol, Gregory M. Bonito, Kevin J. Liu:
FastNet: Fast and Accurate Statistical Inference of Phylogenetic Networks Using Large-Scale Genomic Sequence Data. 242-259 - Erin K. Molloy, Tandy J. Warnow:
NJMerge: A Generic Technique for Scaling Phylogeny Estimation Methods and Its Application to Species Trees. 260-276 - Dikshant Pradhan, Mohammed El-Kebir:
On the Non-uniqueness of Solutions to the Perfect Phylogeny Mixture Problem. 277-293 - Wei Wang, Jack Smith, Hussein A. Hejase, Kevin J. Liu:
Non-parametric and Semi-parametric Support Estimation Using SEquential RESampling Random Walks on Biomolecular Sequences. 294-308 - Mathias Weller:
Linear-Time Tree Containment in Phylogenetic Networks. 309-323
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