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Caroline Colijn
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Publications
- 2024
- [i1]Cédric Chauve, Caroline Colijn, Louxin Zhang:
A Vector Representation for Phylogenetic Trees. CoRR abs/2405.07110 (2024) - 2023
- [j16]Shijia Wang, Shufei Ge, Benjamin Sobkowiak, Liangliang Wang, Louis Grandjean, Caroline Colijn, Lloyd T. Elliott:
Genome-Wide Association with Uncertainty in the Genetic Similarity Matrix. J. Comput. Biol. 30(2): 189-203 (2023) - 2021
- [j14]Shijia Wang, Shufei Ge, Caroline Colijn, Priscila Biller, Liangliang Wang, Lloyd T. Elliott:
Estimating Genetic Similarity Matrices Using Phylogenies. J. Comput. Biol. 28(6): 587-600 (2021) - [j13]Paul F. Tupper, Caroline Colijn:
COVID-19 in schools: Mitigating classroom clusters in the context of variable transmission. PLoS Comput. Biol. 17(7) (2021) - 2020
- [j12]Cornelia Metzig, Caroline Colijn:
A Maximum Entropy Method for the Prediction of Size Distributions. Entropy 22(3): 312 (2020) - [j10]Cornelia Metzig, Matthew Gould, Roshan Noronha, Roshani Abbey, Mark Sandler, Caroline Colijn:
Classification of origin with feature selection and network construction for folk tunes. Pattern Recognit. Lett. 133: 356-364 (2020) - 2019
- [j9]Cornelia Metzig, Oliver Ratmann, Daniela Bezemer, Caroline Colijn:
Phylogenies from dynamic networks. PLoS Comput. Biol. 15(2) (2019) - 2017
- [j8]Don Klinkenberg, Jantien A. Backer, Xavier Didelot, Caroline Colijn, Jacco Wallinga:
Simultaneous inference of phylogenetic and transmission trees in infectious disease outbreaks. PLoS Comput. Biol. 13(5) (2017) - [j7]Nick Fyson, Jerry King, Thomas Belcher, Andrew Preston, Caroline Colijn:
A curated genome-scale metabolic model of Bordetella pertussis metabolism. PLoS Comput. Biol. 13(7) (2017) - 2016
- [j5]Leonid Chindelevitch, Caroline Colijn, Prashini Moodley, Douglas Wilson, Ted Cohen:
ClassTR: Classifying Within-Host Heterogeneity Based on Tandem Repeats with Application to Mycobacterium tuberculosis Infections. PLoS Comput. Biol. 12(2) (2016) - 2013
- [j4]Katy Robinson, Nick Fyson, Ted Cohen, Christophe Fraser, Caroline Colijn:
How the Dynamics and Structure of Sexual Contact Networks Shape Pathogen Phylogenies. PLoS Comput. Biol. 9(6) (2013)
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