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Boyan Yordanov
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2020 – today
- 2023
- [j8]Boyan Yordanov, Sara-Jane Dunn, Colin Gravill, Himanshu Arora, Hillel Kugler, Christoph M. Wintersteiger:
The Reasoning Engine: A Satisfiability Modulo Theories-Based Framework for Reasoning About Discrete Biological Models. J. Comput. Biol. 30(9): 1046-1058 (2023) - 2022
- [c18]Boyan Yordanov, Sara-Jane Dunn, Colin Gravill, Hillel Kugler, Christoph M. Wintersteiger:
An SMT-Based Framework for Reasoning About Discrete Biological Models. ISBRA 2022: 114-125 - 2021
- [j7]Sara-Jane Dunn, Hillel Kugler, Boyan Yordanov:
Formal Analysis of Network Motifs Links Structure to Function in Biological Programs. IEEE ACM Trans. Comput. Biol. Bioinform. 18(1): 261-271 (2021) - [j6]Annalisa Occhipinti, Youssef Hamadi, Hillel Kugler, Christoph M. Wintersteiger, Boyan Yordanov, Claudio Angione:
Discovering Essential Multiple Gene Effects Through Large Scale Optimization: An Application to Human Cancer Metabolism. IEEE ACM Trans. Comput. Biol. Bioinform. 18(6): 2339-2352 (2021)
2010 – 2019
- 2019
- [c17]Carlo Spaccasassi, Boyan Yordanov, Andrew Phillips, Neil Dalchau:
Fast Enumeration of Non-isomorphic Chemical Reaction Networks. CMSB 2019: 224-247 - [p1]Sara-Jane Dunn, Boyan Yordanov:
Automated Reasoning for the Synthesis and Analysis of Biological Programs. Automated Reasoning for Systems Biology and Medicine 2019: 37-62 - 2018
- [c16]Hillel Kugler, Sara-Jane Dunn, Boyan Yordanov:
Formal Analysis of Network Motifs. CMSB 2018: 111-128 - [c15]Alessandro Abate, Luca Cardelli, Marta Kwiatkowska, Luca Laurenti, Boyan Yordanov:
Experimental Biological Protocols with Formal Semantics. CMSB 2018: 165-182 - [d1]Youssef Hamadi, Claudio Angione, Hillel Kugler, Christoph M. Wintersteiger, Boyan Yordanov:
Large-scale Genetic Exploration of Genome-wide Models: an Application to Human Cancer Metabolism. IEEE DataPort, 2018 - 2017
- [i3]Alessandro Abate, Luca Cardelli, Marta Kwiatkowska, Luca Laurenti, Boyan Yordanov:
Experimental Biological Protocols with Formal Semantics. CoRR abs/1710.08016 (2017) - 2016
- [j5]Yoli Shavit, Boyan Yordanov, Sara-Jane Dunn, Christoph M. Wintersteiger, Tomoki Otani, Youssef Hamadi, Frederick J. Livesey, Hillel Kugler:
Automated Synthesis and Analysis of Switching Gene Regulatory Networks. Biosyst. 146: 26-34 (2016) - [c14]Peter Backeman, Christoph M. Wintersteiger, Boyan Yordanov, Sara-Jane Dunn:
Algebraic Polynomial-based Synthesis for Abstract Boolean Network Analysis. SMT@IJCAR 2016: 41-50 - 2015
- [c13]Neil Dalchau, Niall Murphy, Rasmus L. Petersen, Boyan Yordanov:
Synthesizing and Tuning Chemical Reaction Networks with Specified Behaviours. DNA 2015: 16-33 - [c12]Yoli Shavit, Boyan Yordanov, Sara-Jane Dunn, Christoph M. Wintersteiger, Youssef Hamadi, Hillel Kugler:
Switching Gene Regulatory Networks. IPCAT 2015: 131-144 - [i2]Neil Dalchau, Niall Murphy, Rasmus L. Petersen, Boyan Yordanov:
Synthesizing and tuning chemical reaction networks with specified behaviours. CoRR abs/1508.04403 (2015) - 2014
- [c11]Nicola Paoletti, Boyan Yordanov, Youssef Hamadi, Christoph M. Wintersteiger, Hillel Kugler:
Analyzing and Synthesizing Genomic Logic Functions. CAV 2014: 343-357 - [c10]Markus N. Rabe, Christoph M. Wintersteiger, Hillel Kugler, Boyan Yordanov, Youssef Hamadi:
Symbolic Approximation of the Bounded Reachability Probability in Large Markov Chains. QEST 2014: 388-403 - 2013
- [j4]Boyan Yordanov, Jana Tumova, Ivana Cerná, Jiri Barnat, Calin Belta:
Formal analysis of piecewise affine systems through formula-guided refinement. Autom. 49(1): 261-266 (2013) - [c9]Boyan Yordanov, Christoph M. Wintersteiger, Youssef Hamadi, Andrew Phillips, Hillel Kugler:
Functional Analysis of Large-Scale DNA Strand Displacement Circuits. DNA 2013: 189-203 - [c8]Boyan Yordanov, Christoph M. Wintersteiger, Youssef Hamadi, Hillel Kugler:
SMT-Based Analysis of Biological Computation. NASA Formal Methods 2013: 78-92 - 2012
- [j3]Boyan Yordanov, Jana Tumova, Ivana Cerna, Jiri Barnat, Calin Belta:
Temporal Logic Control of Discrete-Time Piecewise Affine Systems. IEEE Trans. Autom. Control. 57(6): 1491-1504 (2012) - [c7]Boyan Yordanov, Evan Appleton, Rishi Ganguly, Ebru Aydin Gol, Swati Banerjee Carr, Swapnil Bhatia, Traci Haddock, Calin Belta, Douglas Densmore:
Experimentally driven verification of synthetic biological circuits. DATE 2012: 236-241 - 2011
- [c6]Boyan Yordanov, Calin Belta:
A formal verification approach to the design of synthetic gene networks. CDC/ECC 2011: 4873-4878 - [i1]Boyan Yordanov, Calin Belta:
A Formal Verification Approach to the Design of Synthetic Gene Networks. CoRR abs/1109.1275 (2011) - 2010
- [j2]Boyan Yordanov, Calin Belta:
Formal Analysis of Discrete-Time Piecewise Affine Systems. IEEE Trans. Autom. Control. 55(12): 2834-2840 (2010) - [c5]Jana Tumova, Boyan Yordanov, Calin Belta, Ivana Cerna, Jiri Barnat:
A symbolic approach to controlling piecewise affine systems. CDC 2010: 4230-4235 - [c4]Boyan Yordanov, Jana Tumova, Calin Belta, Ivana Cerna, Jiri Barnat:
Formal analysis of piecewise affine systems through formula-guided refinement. CDC 2010: 5899-5904
2000 – 2009
- 2009
- [c3]Boyan Yordanov, Calin Belta:
Temporal logic control of discrete-time piecewise affine systems. CDC 2009: 3182-3187 - 2008
- [c2]Boyan Yordanov, Calin Belta:
Formal analysis of Piecewise Affine systems under parameter uncertainty with application to gene networks. ACC 2008: 2767-2772 - [c1]Boyan Yordanov, Calin Belta:
Parameter Synthesis for Piecewise Affine Systems from Temporal Logic Specifications. HSCC 2008: 542-555 - 2007
- [j1]Grégory Batt, Boyan Yordanov, Ron Weiss, Calin Belta:
Robustness analysis and tuning of synthetic gene networks. Bioinform. 23(18): 2415-2422 (2007)
Coauthor Index
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