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ORCIDUsman Roshan
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- affiliation: New Jersey Institute of Technology, Newark, USA
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2020 – today
- 2024
[i9]Yunzhe Xue, Usman Roshan:
Accuracy of TextFooler black box adversarial attacks on 01 loss sign activation neural network ensemble. CoRR abs/2402.07347 (2024)- 2023
- [c33]Yunzhe Xue, Andrew Hu, Rohit Muralidhar, Justin W. Ady, Advaith Bongu, Usman Roshan:
An AI system for evaluating pass fail in fundamentals of laparoscopic surgery from live video in realtime with performative feedback. BIBM 2023: 4167-4171 - [c32]Yunzhe Xue, Olanrewaju Eletta, Justin W. Ady, Nell M. Patel, Advaith Bongu, Usman Roshan:
A Cascaded Neural Network System For Rating Student Performance In Surgical Knot Tying Simulation. ICHI 2023: 58-64 - [c31]Yunzhe Xue, Usman Roshan:
Accuracy of white box and black box adversarial attacks on a sign activation 01 loss neural network ensemble. Tiny Papers @ ICLR 2023 - [i8]Yunzhe Xue, Olanrewaju Eletta, Justin W. Ady, Nell M. Patel, Advaith Bongu, Usman Roshan:
A Cascaded Neural Network System For Rating Student Performance In Surgical Knot Tying Simulation. CoRR abs/2312.14952 (2023) - 2022
- [j12]Yanan Yang, Frank Y. Shih
, Usman Roshan:
Defense Against Adversarial Attacks Based on Stochastic Descent Sign Activation Networks on Medical Images. Int. J. Pattern Recognit. Artif. Intell. 36(3): 2254005:1-2254005:17 (2022) - 2020
- [j11]Abdulrhman Aljouie, Ling Zhong, Usman Roshan:
High scoring segment selection for pairwise whole genome sequence alignment with the maximum scoring subsequence and GPUs. Int. J. Comput. Biol. Drug Des. 13(1): 71-81 (2020) - [c30]Zhibo Yang, Yanan Yang, Yunzhe Xue, Frank Y. Shih, Justin W. Ady, Usman Roshan:
Accurate and adversarially robust classification of medical images and ECG time-series with gradient-free trained sign activation neural networks. BIBM 2020: 2456-2460 - [c29]Abdulrhman Aljouie, Yunzhe Xue, Meiyan Xie, Usman Roshan:
Challenges in predicting glioma survival time in multi-modal deep networks. BIBM 2020: 2558-2562 - [c28]Meiyan Xie, Yunzhi Li, Yunzhe Xue, Lauren Huntress, William Beckerman, Saum A. Rahimi, Justin W. Ady, Usman Roshan:
Vessel lumen segmentation in carotid artery ultrasounds with the U-Net convolutional neural network. BIBM 2020: 2680-2684 - [c27]Yanan Yang, Fadi G. Farhat, Yunzhe Xue, Frank Y. Shih, Usman Roshan:
Classification of Histopathology Images with Random Depthwise Convolutional Neural Networks. ICBRA 2020: 22-27 - [c26]Yunzhe Xue, Meiyan Xie, Usman Roshan:
Towards adversarial robustness with 01 loss neural networks. ICMLA 2020: 1304-1309 - [c25]Meiyan Xie, Yunzhu Li, Yunzhe Xue, Lauren Huntress, William Beckerman, Saum A. Rahimi, Justin W. Ady, Usman W. Roshan:
Two-stage and dual-decoder convolutional U-Net ensembles for reliable vessel and plaque segmentation in carotid ultrasound images. ICMLA 2020: 1376-1381 - [c24]Yunzhe Xue, Meiyan Xie, Usman Roshan:
On the transferability of adversarial examples between convex and 01 loss models. ICMLA 2020: 1460-1467 - [i7]Yunzhe Xue, Meiyan Xie, Usman Roshan:
Robust binary classification with the 01 loss. CoRR abs/2002.03444 (2020) - [i6]Yunzhe Xue, Meiyan Xie, Usman Roshan:
On the transferability of adversarial examples between convex and 01 loss models. CoRR abs/2006.07800 (2020) - [i5]Yunzhe Xue, Meiyan Xie, Usman Roshan:
Towards adversarial robustness with 01 loss neural networks. CoRR abs/2008.09148 (2020) - [i4]Yunzhe Xue, Meiyan Xie, Usman Roshan:
Defending against substitute model black box adversarial attacks with the 01 loss. CoRR abs/2009.09803 (2020)
2010 – 2019
- 2019
- [c23]Xin Yin, Vincenzo Musco, Iulian Neamtiu, Usman Roshan:
Statistically Rigorous Testing of Clustering Implementations. AITest 2019: 91-98 - [c22]Abdulrhman Aljouie, Usman Roshan:
Multi-path convolutional neural network for glioblastoma survival group prediction with point mutations and demographic features. BIBM 2019: 1274-1279 - [c21]Meiyan Xie, Yunzhu Li, Yunzhe Xue, Randy Shafritz, Saum A. Rahimi, Justin W. Ady, Usman W. Roshan:
Vessel lumen segmentation in internal carotid artery ultrasounds with deep convolutional neural networks. BIBM 2019: 2393-2398 - [c20]Yunzhe Xue, Meiyan Xie, Fadi G. Farhat, Olga Boukrina, A. M. Barrett, Jeffrey R. Binder, Usman W. Roshan, William W. Graves:
A Multi-path Decoder Network for Brain Tumor Segmentation. BrainLes@MICCAI (2) 2019: 255-265 - [c19]Yunzhe Xue, Yanan Yang, Fadi G. Farhat, Frank Y. Shih, Olga Boukrina, A. M. Barrett, Jeffrey R. Binder, William W. Graves, Usman W. Roshan:
Brain Tumor Classification with Tumor Segmentations and a Dual Path Residual Convolutional Neural Network from MRI and Pathology Images. BrainLes@MICCAI (2) 2019: 360-367 - [c18]Meiyan Xie, Yunzhe Xue, Usman Roshan:
Stochastic Coordinate Descent for 01 Loss and Its Sensitivity to Adversarial Attacks. ICMLA 2019: 299-304 - [c17]Yunzhe Xue, Usman Roshan:
Image Classification and Retrieval with Random Depthwise Signed Convolutional Neural Networks. IWANN (1) 2019: 492-506 - [c16]Meiyan Xie, Usman Roshan:
Exploring Classification, Clustering, and Its Limits in a Compressed Hidden Space of a Single Layer Neural Network with Random Weights. IWANN (1) 2019: 507-516 - [i3]Yunzhe Xue, Fadi G. Farhat, Olga Boukrina, A. M. Barrett, Jeffrey R. Binder, Usman W. Roshan, William W. Graves:
A multi-path 2.5 dimensional convolutional neural network system for segmenting stroke lesions in brain MRI images. CoRR abs/1905.10835 (2019) - [i2]Yunzhe Xue, Meiyan Xie, Fadi G. Farhat, Olga Boukrina, A. M. Barrett, Jeffrey R. Binder, Usman W. Roshan, William W. Graves:
A fully 3D multi-path convolutional neural network with feature fusion and feature weighting for automatic lesion identification in brain MRI images. CoRR abs/1907.07807 (2019) - 2018
- [c15]Abdulrhman Aljouie, Nihir Patel, Usman Roshan:
Cross-validation and cross-study validation of kidney cancer with machine learning and whole exome sequences from the National Cancer Institute. CIBCB 2018: 1-6 - [i1]Yunzhe Xue, Usman Roshan:
Random depthwise signed convolutional neural networks. CoRR abs/1806.05789 (2018) - 2016
- [j10]Abdulrhman Aljouie, Nihir Patel, Bharati Jadhav, Usman Roshan:
Cross-validation and cross-study validation of chronic lymphocytic leukaemia with exome sequences and machine learning. Int. J. Data Min. Bioinform. 16(1): 47-63 (2016) - 2015
- [c14]Nihir Patel, Bharati Jhadav, Abdulrhman Aljouie, Usman Roshan:
Cross-validation and cross-study validation of chronic lymphocytic leukemia with exome sequences and machine learning. BIBM 2015: 1367-1374 - [c13]Abdulrhman Aljouie, Usman Roshan:
Prediction of Continuous Phenotypes in Mouse, Fly, and Rice Genome Wide Association Studies with Support Vector Regression SNPs and Ridge Regression Classifier. ICMLA 2015: 1246-1250 - 2014
- [c12]Turki Turki, Usman Roshan:
Weighted Maximum Variance Dimensionality Reduction. MCPR 2014: 11-20 - [c11]Turki Turki, Muhammad Ihsan, Nouf Turki, Jie Zhang, Usman Roshan, Zhi Wei:
Top-k Parametrized Boost. MIKE 2014: 91-98 - 2010
- [j9]Satish Chikkagoudar, Dennis R. Livesay, Usman Roshan:
PLAST-ncRNA: Partition function Local Alignment Search Tool for non-coding RNA sequences. Nucleic Acids Res. 38(Web-Server-Issue): 59-63 (2010)
2000 – 2009
- 2008
- [j8]Usman Roshan, Satish Chikkagoudar, Dennis R. Livesay:
Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities. BMC Bioinform. 9 (2008) - 2007
- [j7]Dennis R. Livesay, Patrick D. Kidd, Sepehr Eskandari, Usman Roshan:
Assessing the ability of sequence-based methods to provide functional insight within membrane integral proteins: a case study analyzing the neurotransmitter/Na+ symporter family. BMC Bioinform. 8 (2007) - [j6]Satish Chikkagoudar, Usman Roshan, Dennis R. Livesay:
eProbalign: generation and manipulation of multiple sequence alignments using partition function posterior probabilities. Nucleic Acids Res. 35(Web-Server-Issue): 675-677 (2007) - 2006
- [j5]David A. Bader, Usman Roshan, Alexandros Stamatakis:
Computational Grand Challenges in Assembling the Tree of Life: Problems and Solutions. Adv. Comput. 68: 128-179 (2006) - [j4]Usman Roshan, Dennis R. Livesay:
Probalign: multiple sequence alignment using partition function posterior probabilities. Bioinform. 22(22): 2715-2721 (2006) - [j3]Yuri Dotsenko, Cristian Coarfa, Luay Nakhleh, John M. Mellor-Crummey, Usman Roshan:
PRec-I-DCM3: a parallel framework for fast and accurate large-scale phylogeny reconstruction. Int. J. Bioinform. Res. Appl. 2(4): 407-419 (2006) - [c10]Usman Roshan, Dennis R. Livesay, Satish Chikkagoudar:
Improving progressive alignment for phylogeny reconstruction using parsimonious guide-trees. BIBE 2006: 159-164 - 2005
- [j2]Zhihua Du, Feng Lin, Usman W. Roshan:
Reconstruction of large phylogenetic trees: A parallel approach. Comput. Biol. Chem. 29(4): 273-280 (2005) - [c9]Usman Roshan, Dennis R. Livesay, David La:
Improved Phylogenetic Motif Detection Using Parsimony. BIBE 2005: 19-26 - [c8]Z. Du, Alexandros Stamatakis, F. Lin, Usman Roshan, Luay Nakhleh:
Parallel Divide-and-Conquer Phylogeny Reconstruction by Maximum Likelihood. HPCC 2005: 776-785 - [c7]Cristian Coarfa, Yuri Dotsenko, John M. Mellor-Crummey, Luay Nakhleh, Usman Roshan:
PRec-I-DCM3: A Parallel Framework for Fast and Accurate Large Scale Phylogeny Reconstruction. ICPADS (2) 2005: 346-350 - 2004
- [c6]Usman Roshan, Bernard M. E. Moret, Tandy J. Warnow, Tiffani L. Williams:
Rec-I-DCM3: A Fast Algorithmic Technique for Reconstructing Large Phylogenetic Trees. CSB 2004: 98-109 - 2003
- [j1]Inderjit S. Dhillon, Edward M. Marcotte, Usman Roshan:
Diametrical clustering for identifying anti-correlated gene clusters. Bioinform. 19(13): 1612-1619 (2003) - 2002
- [c5]Luay Nakhleh, Bernard M. E. Moret, Usman Roshan, Katherine St. John, Jerry Sun, Tandy J. Warnow:
The Accuracy of Fast Phylogenetic Methods for Large Datasets. Pacific Symposium on Biocomputing 2002: 211-222 - [c4]Luay Nakhleh, Usman Roshan, Lisa Vawter, Tandy J. Warnow:
Estimating the Deviation from a Molecular Clock. WABI 2002: 287-299 - [c3]Bernard M. E. Moret, Usman Roshan, Tandy J. Warnow:
Sequence-Length Requirements for Phylogenetic Methods. WABI 2002: 343-356 - 2001
- [c2]Luay Nakhleh, Usman Roshan, Katherine St. John, Jerry Sun, Tandy J. Warnow:
Designing fast converging phylogenetic methods. ISMB (Supplement of Bioinformatics) 2001: 190-198 - [c1]Luay Nakhleh, Usman Roshan, Katherine St. John, Jerry Sun, Tandy J. Warnow:
The Performance of Phylogenetic Methods on Trees of Bounded Diameter. WABI 2001: 214-226
Coauthor Index
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last updated on 2024-10-07 21:19 CEST by the dblp team
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