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ORCIDInternational Journal of Computational Biology and Drug Design, Volume 13
Volume 13, Number 1, 2020
- Ruslan T. Mardugalliamov, Kamal Al-Nasr
, Matthew Hayes:
A hidden Markov model-based approach to reconstructing double minute chromosome amplicons. 5-20 - Rafat Alam, G. M. Sayedur Rahman, Nahid Hasan, Abu Sayeed Chowdhury:
A De-Novo drug design and ADMET study to design small molecule stabilisers targeting mutant (V210I) human prion protein against familial Creutzfeldt-Jakob disease (fCJD). 21-35 - Wen-Hao Chiang, Li Shen, Lang Li, Xia Ning:
Drug-drug interaction prediction based on co-medication patterns and graph matching. 36-57 - Jingwen Yan, V. Vinesh Raja, Zhi Huang, Enrico Amico, Kwangsik Nho, Shiaofen Fang, Olaf Sporns, Yu-Chien Wu, Andrew J. Saykin, Joaquín Goñi, Li Shen:
Brain-wide structural connectivity alterations under the control of Alzheimer risk genes. 58-70 - Abdulrhman Aljouie, Ling Zhong, Usman Roshan:
High scoring segment selection for pairwise whole genome sequence alignment with the maximum scoring subsequence and GPUs. 71-81 - Meltem Apaydin, Liang Xu, Bo Zeng, Xiaoning Qian:
Pessimistic optimisation for modelling microbial communities with uncertainty. 82-97 - Hongzhu Cui, Chong Zhou, Xinyu Dai, Yuting Liang, Randy C. Paffenroth, Dmitry Korkin:
Boosting gene expression clustering with system-wide biological information: a robust autoencoder approach. 98-123 - Babak Soltanalizadeh, Erika Gonzalez Rodriguez, Vahed Maroufy, W. Jim Zheng, Hulin Wu:
Modelling of hypoxia gene expression for three different cancer cell lines. 124-143 - John Smith, Matthew Conover, Natalie Stephenson, Jesse Eickholt, Dong Si, Miao Sun, Renzhi Cao:
TopQA: a topological representation for single-model protein quality assessment with machine learning. 144-153
Volume 13, Number 2, 2020
- Rajagopal Kalirajan, A. Pandiselvi, B. Gowramma:
Molecular docking, in-silico ADMET screening, MM-GBSA binding free energy of some novel isoxazole substituted 9-amnoacridines as HER2 inhibitors targetting breast cancer. 155-168 - Jean Marie Ntaganda:
Mathematical modelling of hepatitis C virus dynamics response to therapeutic effects of interferon and ribavirin. 169-180 - Priya Antony, Bincy Baby, Zahrah Al Homedi, Walaa Al Halabi, Amanat Ali, Ranjit Vijayan:
Polypharmacological potential of natural compounds against prostate cancer explored using molecular docking and molecular dynamics simulations. 181-199 - T. H. Samaha:
Interactions of Leptospiral PI-PLC with the membrane phosphoinositides: an insight of the protein-phospholipid association in the pathogenesis. 200-208 - Anindita Roy Chowdhury (Chakravarty), H. G. Nagendra, Alpana Seal:
Correlation among hydrophobic aromatic and aliphatic residues in the six enzyme classes. 209-223 - Charaf Eddine Bailoul, Noureddine Alaa:
Modelling and simulation of transmission lines in a biological neuron. 224-234
Volume 13, Number 3, 2020
- Samuel Cosmas, Olanrewaju Ayodeji Durojaye, Parker Elijah Joshua, Joyce Oloaigbe Ogidigo, Collins Audu Difa, Justus Nmaduka Nwachukwu:
Comparative in-silico parmacokinetics and molecular docking study on gedunin isolated from Azadirachta indica, its modified derivatives and selected antifolate drugs as potential dihydrofolate reductase inhibitors of Plasmodium falciparum. 237-254 - S. S. Ariya, Baby Joseph, Jemmy Christy:
Exploring the antineoplastic effect of phytochemicals from Ipomea sepiaria against matrix metallopeptidases: a pharmacoinformatics approach. 255-271 - Praveen Kumar Singh:
Inter k-shell connectivity: a novel computational approach to identify drug targets. 272-281 - Aditi Rathee, Kanika Gupta, Seema Kumari, Sanjay Chhibber, Ashok Kumar:
In-silico analysis of peptidoglycan hydrolases from Serratia marcescens and other Serratia species. 282-301 - Vidhya Gopalakrishnan, Arvind Nambiar, Sukanya Basu, G. Madhuvanthi:
PPI network analysis of diabetic retinopathy genes. 302-315 - B. Bharathi, P. Bindhu Shamily:
A review on iris recognition system for person identification. 316-331 - Swetha Sunkar, Madineni Aravind, S. Surya Chandan Reddy, Desam Neeharika:
In silico approach for the prediction of functional nsSNPs in WIF1 gene of WNT pathway. 332-345
Volume 13, Number 4, 2020
- Rajagopal Kalirajan, K. Iniyavan, G. Rathika, A. Pandiselvi:
Molecular docking studies, in-silico ADMET screening, MM-GBSA binding free energy of some novel chalcone substituted 9-anilinoacridines as topoisomerase II inhibitors. 347-358 - Rohini Kanagavelu, Shanthi Veerappapillai:
Identification of novel neuraminidase inhibitors through e-pharmacophore based virtual screening. 359-377 - Nikita Chordia, Deepak Bhayal, Priyesh Hardia:
In silico drug target identification and pharmacophore mapping for Leishmania donovani based on metabolic pathways. 378-389 - Sobia Nazir Chaudry, Waqar Hussain, Nouman Rasool:
Inhibitory role of selective phytochemicals against HIV-2 protease: a study of molecular docking, ADMET and DFT computations. 390-414 - Sana Ashiq, Kanwal Ashiq:
In-silico analysis of PON1, PON2 and PON3 genes role in coronary artery disease. 415-423
Volume 13, Numbers 5/6, 2020
- Ruibang Luo, Tak Wah Lam, Michael C. Schatz:
Skyhawk: an artificial neural network-based discriminator for reviewing clinically significant genomic variants. 431-437 - Mark R. Zucker, Kevin R. Coombes:
Generating simulated SNP array and sequencing data to assess genomic segmentation algorithms. 438-453 - Fan Zhang, Michael D. Kuo:
Rapid evolution of expression levels in hepatocellular carcinoma. 454-474 - Matthew Hayes, Derrick Mullins:
The minimum weight clique partition problem and its application to structural variant calling. 475-487 - Bjarne Bartlett, Yong Zhu, Mark Menor, Vedbar S. Khadka, Jicai Zhang, Jie Zheng, Bin Jiang, Youping Deng:
Development of a RNA-Seq based prognostic signature for colon cancer. 488-503 - Achal Awasthi, Shenglong Tan, Travis S. Johnson, Xiaokui-Molly Mo, Kunjie Fan, Yan Zhang:
PgenePapers: a novel database and search tools of reported regulatory pseudogenes. 504-519 - Xiuquan Wang, Keli Xu, Junqing Wang, Yunyun Zhou:
LCLE: a web portal for lncRNA network analysis in liver cancer. 520-528 - Yuping Zhang, Yang Chen, Zhengqing Ouyang:
PATH: An interactive web platform for analysis of time-course high-dimensional genomic data. 529-538 - Satish Mahadevan Srinivasan, Yok-Fong Paat, Philmore Halls, Ruth Kalule, Thomas E. Harvey:
Predicting re-admission to hospital for diabetes treatment: a machine learning solution. 539-554 - Maciej Pietrzak, Gerard Lozanski, Michael Grever, Leslie Andritsos, James S. Blachly, Kerry Rogers, Michal Seweryn:
On the analysis of the human immunome via an information theoretical approach. 555-581 - C. D. Vandana, K. N. Shanti, Prashantha Karunakar, Vivek Chandramohan:
In silico studies of bioactive phytocompounds with anticancer activity from in vivo and in vitro extracts of Justicia wynaadensis (Nees) T. Anderson. 582-601
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