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2020 – today
- 2020
[j22]Pablo Mier
, Lisanna Paladin, Stella Tamana, Sophia Petrosian, Borbála Hajdu-Soltész, Annika Urbanek, Aleksandra Gruca, Dariusz Plewczynski, Marcin Grynberg, Pau Bernadó, Zoltán Gáspári, Christos A. Ouzounis, Vasilis J. Promponas, Andrey V. Kajava, John M. Hancock, Silvio C. E. Tosatto, Zsuzsanna Dosztányi, Miguel A. Andrade-Navarro:
Disentangling the complexity of low complexity proteins. Briefings Bioinform. 21(2): 458-472 (2020)- [j21]Jon C. Ison, Hervé Ménager, Bryan Brancotte, Erik Jaaniso, Ahto Salumets, Tomás Racek, Anna-Lena Lamprecht, Magnus Palmblad, Matús Kalas, Piotr Chmura, John M. Hancock, Veit Schwämmle, Hans-Ioan Ienasescu:
Community curation of bioinformatics software and data resources. Briefings Bioinform. 21(5): 1697-1705 (2020) - [j20]Patryk Jarnot, Joanna Ziemska-Legiecka, Laszlo Dobson, Matthew Merski, Pablo Mier, Miguel A. Andrade-Navarro, John M. Hancock, Zsuzsanna Dosztányi, Lisanna Paladin, Marco Necci, Damiano Piovesan, Silvio C. E. Tosatto, Vasilis J. Promponas, Marcin Grynberg, Aleksandra Gruca:
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins. Nucleic Acids Res. 48(Webserver-Issue): W77-W84 (2020) - [i4]David Salgado, Irina M. Armean, Michael Baudis, Sergi Beltran, Salvador Capella-Gutiérrez, Denise Carvalho-Silva, Victoria Dominguez Del Angel, Joaquín Dopazo, Laura I. Furlong, Bo Gao, Leyla Jael García Castro, Dietlind Gerloff, Ivo Gut, Attila Gyenesei, Nina Habermann, John M. Hancock, Marc Hanauer, Eivind Hovig, Lennart F. Johansson, Thomas Keane, Jan Korbel, Katharina B. Lauer, Steve Laurie, Brane Leskosek, David Lloyd, Tomàs Marquès-Bonet, Hailiang Mei, Katalin Monostory, Janet Piñero, Krzysztof Poterlowicz, Ana Rath, Pubudu Samarakoon, Ferran Sanz, Gary Saunders, Daoud Sie, Morris A. Swertz, Kirill Tsukanov, Alfonso Valencia, Marko Vidak, Cristina Yenyxe González, Bauke Ylstra, Christophe Béroud:
The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research. F1000Research 9: 1229 (2020)
2010 – 2019
- 2017
- [j19]Carlos Horro, Martin Cook, Teresa K. Attwood, Michelle D. Brazas, John M. Hancock, Patricia M. Palagi, Manuel Corpas, Rafael C. Jiménez:
BioCIDER: a Contextualisation InDEx for biological Resources discovery. Bioinform. 33(16): 2607-2608 (2017) - [i3]Annemarie H. Eckes, Tomasz Gubala, Piotr Nowakowski, Tomasz Szymczyszyn, Rachel Wells, Judith A. Irwin, Carlos Horro, John M. Hancock, Graham J. King, Sarah C. Dyer, Wiktor Jurkowski:
Introducing the Brassica Information Portal: Towards integrating genotypic and phenotypic Brassica crop data. F1000Research 6: 465- (2017) - [i2]Aleksandra Pawlik, Celia W. G. van Gelder, Aleksandra Nenadic, Patricia M. Palagi, Eija Korpelainen, Philip Lijnzaad, Diana Marek, Susanna-Assunta Sansone, John M. Hancock, Carole A. Goble:
Developing a strategy for computational lab skills training through Software and Data Carpentry: Experiences from the ELIXIR Pilot action. F1000Research 6: 1040- (2017) - [i1]Haydee Artaza, John M. Hancock, Rafael C. Jiménez, Manuel Corpas:
PIsCO: A Performance indicators framework for collection of bioinformatics resource metrics. PeerJ Prepr. 5: e3112 (2017) - 2013
- [j18]Jeremie Becker, Christopher Yau, John M. Hancock, Christopher C. Holmes:
NucleoFinder: a statistical approach for the detection of nucleosome positions. Bioinform. 29(6): 711-716 (2013) - 2011
- [j17]Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki:
Towards BioDBcore: a community-defined information specification for biological databases. Database J. Biol. Databases Curation 2011 (2011) - [j16]Ravensara S. Travillian, Tomasz Adamusiak, Tony Burdett, Michael Gruenberger, John M. Hancock, Ann-Marie Mallon, James Malone, Paul N. Schofield, Helen E. Parkinson:
Anatomy ontologies and potential users: bridging the gap. J. Biomed. Semant. 2(S-4): S3 (2011) - [j15]Pascale Gaudet, Amos Bairoch, Dawn Field, Susanna-Assunta Sansone, Chris F. Taylor, Teresa K. Attwood, Alex Bateman, Judith A. Blake, Carol J. Bult, J. Michael Cherry, Rex L. Chisholm, Guy Cochrane, Charles E. Cook, Janan T. Eppig, Michael Y. Galperin, Robert Gentleman, Carole A. Goble, Takashi Gojobori, John M. Hancock, Douglas G. Howe, Tadashi Imanishi, Janet Kelso, David Landsman, Suzanna E. Lewis, Ilene Karsch-Mizrachi, Sandra E. Orchard, B. F. Francis Ouellette, Shoba Ranganathan, Lorna J. Richardson, Philippe Rocca-Serra, Paul N. Schofield, Damian Smedley, Christopher Southan, Tin Wee Tan, Tatiana A. Tatusova, Patricia L. Whetzel, Owen White, Chisato Yamasaki:
Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res. 39(Database-Issue): 7-10 (2011) - [c6]Ravensara S. Travillian, James Malone, Chao Pang, John M. Hancock, Peter W. H. Holland, Paul N. Schofield, Helen E. Parkinson:
The Vertebrate Bridging Ontology (VBO). ICBO 2011 - 2010
- [j14]Damian Smedley, Paul N. Schofield, Chao-Kung Chen, Vassilis Aidinis, Crysanthi Ainali, Jonathan B. L. Bard, Rudi Balling, Ewan Birney, Andrew Blake, Erik Bongcam-Rudloff, Anthony J. Brookes, Gianni Cesareni, Christina Chandras, Janan T. Eppig, Paul Flicek, Georgios V. Gkoutos, Simon Greenaway, Michael Gruenberger, Jean-Karim Hériché, Andrew Lyall, Ann-Marie Mallon, Dawn Muddyman, Florian Reisinger, Martin Ringwald, Nadia A. Rosenthal, Klaus Schughart, Morris A. Swertz, Gudmundur A. Thorisson, Michael Zouberakis, John M. Hancock:
Finding and sharing: new approaches to registries of databases and services for the biomedical sciences. Database J. Biol. Databases Curation 2010 (2010) - [j13]Michael Zouberakis, Christina Chandras, Morris A. Swertz, Damian Smedley, Michael Gruenberger, Jonathan B. L. Bard, Klaus Schughart, Nadia A. Rosenthal, John M. Hancock, Paul N. Schofield, George Kollias, Vassilis Aidinis:
Mouse Resource Browser - a database of mouse databases. Database J. Biol. Databases Curation 2010 (2010) - [j12]Hugh Morgan, Tim Beck, Andrew Blake, Hilary Gates, Niels C. Adams, Guillaume Debouzy, Sophie Leblanc, Christoph Lengger, Holger Maier, David G. Melvin, Hamid Meziane, Dave Richardson, Sara Wells, Jacqui White, Joe Wood, Martin Hrabé de Angelis, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon:
EuroPhenome: a repository for high-throughput mouse phenotyping data. Nucleic Acids Res. 38(Database-Issue): 577-585 (2010) - [j11]Andrew Blake, Karen Pickford, Simon Greenaway, Steve Thomas, Amanda J. Pickard, Christine M. Williamson, Niels C. Adams, Alison Walling, Tim Beck, Martin Fray, Jo Peters, Tom Weaver, Steve D. M. Brown, John M. Hancock, Ann-Marie Mallon:
MouseBook: an integrated portal of mouse resources. Nucleic Acids Res. 38(Database-Issue): 593-599 (2010)
2000 – 2009
- 2009
- [j10]Christina Chandras, Thomas Weaver, Michael Zouberakis, Damian Smedley, Klaus Schughart, Nadia A. Rosenthal, John M. Hancock, George Kollias, Paul N. Schofield, Vassilis Aidinis:
Models for financial sustainability of biological databases and resources. Database J. Biol. Databases Curation 2009 (2009) - [j9]Alex Webb, John M. Hancock, Christopher C. Holmes:
Phylogenetic inference under recombination using Bayesian stochastic topology selection. Bioinform. 25(2): 197-203 (2009) - [j8]Tim Beck, Hugh Morgan, Andrew Blake, Sara Wells, John M. Hancock, Ann-Marie Mallon:
Practical application of ontologies to annotate and analyse large scale raw mouse phenotype data. BMC Bioinform. 10(S-5) (2009) - 2008
- [j7]Damian Smedley, Morris A. Swertz, Katy Wolstencroft, Glenn Proctor, Michael Zouberakis, Jonathan B. L. Bard, John M. Hancock, Paul N. Schofield:
Solutions for data integration in functional genomics: a critical assessment and case study. Briefings Bioinform. 9(6): 532-544 (2008) - [j6]Ann-Marie Mallon, Andrew Blake, John M. Hancock:
EuroPhenome and EMPReSS: online mouse phenotyping resource. Nucleic Acids Res. 36(Database-Issue): 715-718 (2008) - [c5]Christina Chandras, Tom Weaver, Michael Zouberakis, John M. Hancock, Paul N. Schofield, Vassilis Aidinis:
Digital preservation - financial sustainability of biological data and material resources. BIBE 2008: 1-6 - [c4]John M. Hancock, Paul N. Schofield, Christina Chandras, Michael Zouberakis, Vassilis Aidinis, Damian Smedley, Nadia A. Rosenthal, Klaus Schughart:
CASIMIR: Coordination and Sustainability of International Mouse Informatics Resources. BIBE 2008: 1-6 - [c3]Michael Zouberakis, Christina Chandras, John M. Hancock, Paul N. Schofield, Vassilis Aidinis:
The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources. BIBE 2008: 1-5 - [c2]Florian Reisinger, Manuel Corpas, John M. Hancock, Henning Hermjakob, Ewan Birney, Pascal Kahlem:
ENFIN - An Integrative Structure for Systems Biology. DILS 2008: 132-143 - 2005
- [j5]Georgios V. Gkoutos, Eain C. J. Green, Simon Greenaway, Andrew Blake, Ann-Marie Mallon, John M. Hancock:
CRAVE: a database, middleware and visualization system for phenotype ontologies. Bioinform. 21(7): 1257-1262 (2005) - [j4]Eain C. J. Green, Georgios V. Gkoutos, Heena V. Lad, Andrew Blake, Joseph Weekes, John M. Hancock:
EMPReSS: European Mouse Phenotyping Resource for Standardized Screens. Bioinform. 21(12): 2930-2931 (2005) - 2004
- [c1]Georgios V. Gkoutos, Eain C. J. Green, Ann-Marie Mallon, John M. Hancock, Duncan Davidson:
Building Mouse Phenotype Ontologies. Pacific Symposium on Biocomputing 2004: 178-189 - 2003
- [j3]Ilham A. Shahmuradov, Alex J. Gammerman, John M. Hancock, Peter M. Bramley, Victor V. Solovyev:
PlantProm: a database of plant promoter sequences. Nucleic Acids Res. 31(1): 114-117 (2003) - 2002
- [j2]M. Mar Albà, Roman A. Laskowski, John M. Hancock:
Detecting cryptically simple protein sequences using the SIMPLE algorithm. Bioinform. 18(5): 672-678 (2002)
1990 – 1999
- 1994
- [j1]John M. Hancock, John S. Armstrong:
SIMPLE34: an improved and enhanced implementation for VAX and Sun computers of the SIMPLE algorithm for analysis of clustered repetitive motifs in nucleotide sequences. Comput. Appl. Biosci. 10(1): 67-70 (1994)
Coauthor Index
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