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ORCIDEdgar Wingender
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- affiliation: University of Göttingen, Germany
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2010 – 2019
- 2019
[j67]Alexander E. Kel, Ulyana Boyarskikh, Philip Stegmaier, Leonid S. Leskov, Andrey V. Sokolov, Ivan S. Yevshin, Nikita Mandrik, Daria Stelmashenko, Jeannette Koschmann, Olga V. Kel-Margoulis, Mathias Krull, Anna Martínez-Cardús
, Sebastian Moran, Manel Esteller, Fedor A. Kolpakov, Maxim Filipenko, Edgar Wingender:
Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer. BMC Bioinform. 20-S(4): 119:1-119:20 (2019)- [r1]Edgar Wingender, Alexander E. Kel, Mathias Krull:
Transcription Factor Databases. Encyclopedia of Bioinformatics and Computational Biology (2) 2019: 134-141 - 2018
- [j66]Xu Hua, Rongjun Tang, Xiuxiu Xu, Zhi Wang, Qi Xu, Luxiao Chen, Edgar Wingender, Jie Li, Chenyu Zhang, Jin Wang:
mirTrans: a resource of transcriptional regulation on microRNAs for human cell lines. Nucleic Acids Res. 46(Database-Issue): D168-D174 (2018) - [j65]Edgar Wingender, Torsten Schoeps, Martin Haubrock, Mathias Krull, Jürgen Dönitz:
TFClass: expanding the classification of human transcription factors to their mammalian orthologs. Nucleic Acids Res. 46(Database-Issue): D343-D347 (2018) - 2017
- [j64]Philip Stegmaier, Alexander E. Kel, Edgar Wingender:
geneXplainR: An R interface for the geneXplain platform. J. Open Source Softw. 2(18): 412 (2017) - 2016
- [j63]Xu Hua, Luxiao Chen, Jin Wang, Jie Li, Edgar Wingender:
Identifying cell-specific microRNA transcriptional start sites. Bioinform. 32(16): 2403-2410 (2016) - 2015
- [j62]Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Edgar Wingender:
Multiobjective triclustering of time-series transcriptome data reveals key genes of biological processes. BMC Bioinform. 16: 200:1-200:19 (2015) - [j61]Cornelia Meckbach, Rebecca Tacke, Xu Hua, Stephan Waack, Edgar Wingender, Mehmet Gültas:
PC-TraFF: identification of potentially collaborating transcription factors using pointwise mutual information. BMC Bioinform. 16: 400:1-400:21 (2015) - [j60]Edgar Wingender, Torsten Schoeps, Martin Haubrock, Jürgen Dönitz:
TFClass: a classification of human transcription factors and their rodent orthologs. Nucleic Acids Res. 43(Database-Issue): 97-102 (2015) - 2014
- [j59]Mehmet Gültas, Güncel Düzgün, Sebastian Herzog, Sven Joachim Jäger, Cornelia Meckbach, Edgar Wingender, Stephan Waack:
Quantum Coupled Mutation Finder: Predicting functionally or structurally important sites in proteins using quantum Jensen-Shannon divergence and CUDA programming. BMC Bioinform. 15: 96 (2014) - [j58]Jürgen Dönitz, Edgar Wingender:
EndoNet: an information resource about the intercellular signaling network. BMC Syst. Biol. 8: 49 (2014) - 2013
- [j57]Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik, Sanghamitra Bandyopadhyay, Edgar Wingender:
Coexpression and coregulation analysis of time-series gene expression data in estrogen-induced breast cancer cell. Algorithms Mol. Biol. 8: 9 (2013) - [j56]Igor V. Deyneko, Alexander E. Kel, Olga V. Kel-Margoulis, Elena V. Deineko, Edgar Wingender, Siegfried Weiss:
MatrixCatch - a novel tool for the recognition of composite regulatory elements in promoters. BMC Bioinform. 14: 241 (2013) - [j55]Mathias Fuchs, Tim Beißbarth, Edgar Wingender, Klaus Jung:
Connecting high-dimensional mRNA and miRNA expression data for binary medical classification problems. Comput. Methods Programs Biomed. 111(3): 592-601 (2013) - [j54]Edgar Wingender:
Criteria for an updated Classification of Human transcription factor DNA-binding Domains. J. Bioinform. Comput. Biol. 11(1) (2013) - [j53]Edgar Wingender, Torsten Schoeps, Jürgen Dönitz:
TFClass: an expandable hierarchical classification of human transcription factors. Nucleic Acids Res. 41(Database-Issue): 165-170 (2013) - [j52]Philip Stegmaier, Alexander E. Kel, Edgar Wingender, Jürgen Borlak:
A Discriminative Approach for Unsupervised Clustering of DNA Sequence Motifs. PLoS Comput. Biol. 9(3) (2013) - [c36]Ralf Eggeling, André Gohr, Pierre-Yves Bourguignon, Edgar Wingender, Ivo Grosse:
Inhomogeneous Parsimonious Markov Models. ECML/PKDD (1) 2013: 321-336 - [e2]Tim Beißbarth, Martin Kollmar, Andreas Leha, Burkhard Morgenstern, Anne-Kathrin Schultz, Stephan Waack, Edgar Wingender:
German Conference on Bioinformatics 2013, GCB 2013, September 10-13, 2013, Göttingen, Germany. OASIcs 34, Schloss Dagstuhl - Leibniz-Zentrum für Informatik 2013, ISBN 978-3-939897-59-0 [contents] - 2012
- [j51]Jie Li, Xu Hua, Martin Haubrock, Jin Wang, Edgar Wingender:
The architecture of the gene regulatory networks of different tissues. Bioinform. 28(18): 509-514 (2012) - [j50]Martin Haubrock, Jie Li, Edgar Wingender:
Using potential master regulator sites and paralogous expansion to construct tissue-specific transcriptional networks. BMC Syst. Biol. 6(S-2): S15 (2012) - [c35]Dietmar Schomburg, Edgar Wingender:
Bioinformatik & Bioinformation: Braunschweig spielt eine führende Rolle. 40 Jahre Informatik @ Braunschweig 2012: 164-171 - [c34]Anirban Bhar, Martin Haubrock, Anirban Mukhopadhyay, Ujjwal Maulik, Sanghamitra Bandyopadhyay, Edgar Wingender:
δ-TRIMAX: Extracting Triclusters and Analysing Coregulation in Time Series Gene Expression Data. WABI 2012: 165-177 - 2011
- [j49]Jin Wang, Martin Haubrock, Kunming Cao, Xu Hua, Chenyu Zhang, Edgar Wingender, Jie Li:
Regulatory coordination of clustered microRNAs based on microRNA-transcription factor regulatory network. BMC Syst. Biol. 5: 199 (2011) - 2010
- [j48]Philip Stegmaier, Mathias Krull, Nico Voss, Alexander E. Kel, Edgar Wingender:
Molecular mechanistic associations of human diseases. BMC Syst. Biol. 4: 124 (2010) - [j47]Edgar Wingender:
Petri Net Applications in Molecular Biology. Silico Biol. 10(1-2): 1-4 (2010)
2000 – 2009
- 2009
- [j46]Björn Goemann, Edgar Wingender, Anatolij Potapov:
An approach to evaluate the topological significance of motifs and other patterns in regulatory networks. BMC Syst. Biol. 3: 53 (2009) - 2008
- [j45]Edgar Wingender:
The TRANSFAC project as an example of framework technology that supports the analysis of genomic regulation. Briefings Bioinform. 9(4): 326-332 (2008) - [j44]Holger Michael, Jennifer Hogan, Alexander E. Kel, Olga V. Kel-Margoulis, Frank Schacherer, Nico Voss, Edgar Wingender:
Building a knowledge base for systems pathology. Briefings Bioinform. 9(6): 518-531 (2008) - [j43]Anatolij Potapov, Björn Goemann, Edgar Wingender:
The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks. BMC Bioinform. 9 (2008) - [j42]Jürgen Dönitz, Björn Goemann, Muriel Lizé, Holger Michael, Nicole Sasse, Edgar Wingender, Anatolij Potapov:
EndoNet: an information resource about regulatory networks of cell-to-cell communication. Nucleic Acids Res. 36(Database-Issue): 689-694 (2008) - 2007
- [j41]Edgar Wingender, Jennifer Hogan, Frank Schacherer, Anatolij Potapov, Olga V. Kel-Margoulis:
Integrating Pathway Data for Systems Pathology. Silico Biol. 7(6): 17-25 (2007) - [j40]Jost Degenhardt, Martin Haubrock, Jürgen Dönitz, Edgar Wingender, Torsten Crass:
DEEP - A tool for differential expression effector prediction. Nucleic Acids Res. 35(Web-Server-Issue): 619-624 (2007) - 2006
- [j39]Tilman Sauer, Ekaterina Shelest, Edgar Wingender:
Evaluating phylogenetic footprinting for human-rodent comparisons. Bioinform. 22(4): 430-437 (2006) - [j38]Alexander E. Kel, Tatiana Konovalova, T. Waleev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender:
Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinations. Bioinform. 22(10): 1190-1197 (2006) - [j37]Alexander E. Kel, Nico Voss, Ruy Jáuregui, Olga V. Kel-Margoulis, Edgar Wingender:
Beyond microarrays: Finding key transcription factors controlling signal transduction pathways. BMC Bioinform. 7(S-2) (2006) - [j36]Xin Chen, Jianmin Wu, Klaus Hornischer, Alexander E. Kel, Edgar Wingender:
TiProD: the Tissue-specific Promoter Database. Nucleic Acids Res. 34(Database-Issue): 104-107 (2006) - [j35]V. Matys, Olga V. Kel-Margoulis, Ellen Fricke, Ines Liebich, Sigrid Land, A. Barre-Dirrie, Ingmar Reuter, D. Chekmenev, Mathias Krull, Klaus Hornischer, Nico Voss, Philip Stegmaier, Birgit Lewicki-Potapov, H. Saxel, Alexander E. Kel, Edgar Wingender:
TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes. Nucleic Acids Res. 34(Database-Issue): 108-110 (2006) - [j34]Anatolij Potapov, Ines Liebich, Jürgen Dönitz, Knut Schwarzer, Nicole Sasse, Torsten Schoeps, Torsten Crass, Edgar Wingender:
EndoNet: an information resource about endocrine networks. Nucleic Acids Res. 34(Database-Issue): 540-545 (2006) - [j33]Mathias Krull, Susanne Pistor, Nico Voss, Alexander E. Kel, Ingmar Reuter, Deborah Kronenberg, Holger Michael, Knut Schwarzer, Anatolij Potapov, Claudia Choi, Olga V. Kel-Margoulis, Edgar Wingender:
TRANSPATH®: an information resource for storing and visualizing signaling pathways and their pathological aberrations. Nucleic Acids Res. 34(Database-Issue): 546-551 (2006) - [j32]T. Waleev, Dmitry Shtokalo, Tatiana Konovalova, Nico Voss, Evgeny Cheremushkin, Philip Stegmaier, Olga V. Kel-Margoulis, Edgar Wingender, Alexander E. Kel:
Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm. Nucleic Acids Res. 34(Web-Server-Issue): 541-545 (2006) - 2005
- [c33]Alexander E. Kel, Tatiana Konovalova, Tagir F. Valeev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender:
Composite Module Analyst: A Fitness-Based Tool for Prediction of Transcription Regulation. German Conference on Bioinformatics 2005: 63-75 - 2004
- [j31]Torsten Crass, Iris Antes, Rico Basekow, Peer Bork, Christian Buning, Maik Christensen, Holger Claussen, Christian Ebeling, Peter Ernst, Valérie Gailus-Durner, Karl-Heinz Glatting, Rolf Gohla, Frank Gößling, Korbinian Grote, Karsten R. Heidtke, Alexander Herrmann, Sean O'Keeffe, O. Kießlich, Sven Kolibal, Jan O. Korbel, Thomas Lengauer, Ines Liebich, Mark van der Linden, Hannes Luz, Kathrin Meissner, Christian von Mering, Heinz-Theodor Mevissen, Hans-Werner Mewes, Holger Michael, Martin Mokrejs, Tobias Müller, Heike Pospisil, Matthias Rarey, Jens G. Reich, Ralf Schneider, Dietmar Schomburg, Steffen Schulze-Kremer, Knut Schwarzer, Ingolf Sommer, Stephan Springstubbe, Sándor Suhai, Gnanasekaran Thoppae, Martin Vingron, Jens Warfsmann, Thomas Werner, Daniel Wetzler, Edgar Wingender, Ralf Zimmer:
The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinform. 20(2): 268-270 (2004) - [j30]Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender:
Recognition of multiple patterns in unaligned sets of sequences: comparison of kernel clustering method with other methods. Bioinform. 20(10): 1512-1516 (2004) - [j29]Takako Takai-Igarashi, Toshihisa Takagi, Holger Michael, Edgar Wingender:
Preface - Third "Ontology Workshop on Ontology and Genomes". Silico Biol. 5(1): 1-3 (2004) - [j28]Holger Michael, Xin Chen, Ellen Fricke, Martin Haubrock, Remko Ricanek, Edgar Wingender:
Deriving an ontology for human gene expression sources from the CYTOMER? database on human organs and cell types. Silico Biol. 5(1): 61-66 (2004) - [j27]Holger Karas, Michael Tysiak, Edgar Wingender:
Quo Vadis Bioinformatik, neue Konzepte und Arbeitsbereiche (Quo Vadis Bioinformatics - New Concepts and Areas). it Inf. Technol. 46(1): 48-50 (2004) - [c32]Alexander E. Kel, Nico Voss, Tatiana Konovalova, Dmitri Tchekmenev, P. Wabnitz, Olga V. Kel-Margoulis, Edgar Wingender:
From Composite Patters to Pathways - Prediction of Key Regulators of Gene Expression. German Conference on Bioinformatics 2004: 189-198 - [c31]Alexander E. Kel, Yuri Tikunov, Nico Voss, Jürgen Borlak, Edgar Wingender:
Application of Kernel Method to Reveal Subtypes of TF Binding Motifs. Regulatory Genomics 2004: 42-51 - 2003
- [j26]Ekaterina Shelest, Alexander E. Kel, Ellen Gößling, Edgar Wingender:
Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods. Silico Biol. 3(1-2): 71-79 (2003) - [j25]Olga V. Kel-Margoulis, Dmitri Tchekmenev, Alexander E. Kel, Ellen Gößling, Klaus Hornischer, Birgit Lewicki-Potapov, Edgar Wingender:
Composition-sensitive analysis of the human genome for regulatory signals. Silico Biol. 3(1-2): 145-171 (2003) - [j24]Takako Takai-Igarashi, Toshihisa Takagi, Edgar Wingender:
Preface: The Second Workshop on Ontology and Genome. Silico Biol. 4(1): 1-3 (2003) - [j23]Edgar Wingender:
TRANSPATH, TRANSFAC and CYTOMER as starting points for an ontology of regulatory networks. Silico Biol. 4(1): 55-61 (2003) - [j22]Mathias Krull, Nico Voss, Claudia Choi, Susanne Pistor, Anatolij Potapov, Edgar Wingender:
TRANSPATH: An integrated database on signal transduction and a tool for array analysis. Nucleic Acids Res. 31(1): 97-100 (2003) - [j21]Richard Münch, Karsten Hiller, Heiko Barg, Dana Heldt, Simone Linz, Edgar Wingender, Dieter Jahn:
PRODORIC: prokaryotic database of gene regulation. Nucleic Acids Res. 31(1): 266-269 (2003) - [j20]V. Matys, Ellen Fricke, R. Geffers, Ellen Gößling, Martin Haubrock, Reinhard Hehl, Klaus Hornischer, Dagmar Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Dorothee-U. Kloos, Sigrid Land, Birgit Lewicki-Potapov, Holger Michael, Richard Münch, Ingmar Reuter, Stella Rotert, H. Saxel, Maurice Scheer, S. Thiele, Edgar Wingender:
TRANSFAC®: transcriptional regulation, from patterns to profiles. Nucleic Acids Res. 31(1): 374-378 (2003) - [j19]Alexander E. Kel, Ellen Gößling, Ingmar Reuter, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender:
MATCHTM: a tool for searching transcription factor binding sites in DNA sequences. Nucleic Acids Res. 31(13): 3576-3579 (2003) - [c30]Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender:
Recognition of multiple patterns in unaligned sets of sequences. Comparison of kernel clustering method with other methods. German Conference on Bioinformatics 2003: 63-68 - 2002
- [j18]Edgar Wingender:
The German Conference on Bioinformatics 2001. Silico Biol. 2(3): 165-167 (2002) - [j17]Olga V. Kel-Margoulis, Alexander E. Kel, Ingmar Reuter, Igor Deineko, Edgar Wingender:
TRANSCompel®: a database on composite regulatory elements in eukaryotic genes. Nucleic Acids Res. 30(1): 332-334 (2002) - [j16]Ines Liebich, Jürgen Bode, Matthias Frisch, Edgar Wingender:
S/MARt DB: a database on scaffold/matrix attached regions. Nucleic Acids Res. 30(1): 372-374 (2002) - [c29]Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender, Alexander E. Kel:
Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters. Pacific Symposium on Biocomputing 2002: 187-198 - 2001
- [j15]Frank Schacherer, Claudia Choi, Ulrike Götze, Mathias Krull, Susanne Pistor, Edgar Wingender:
The TRANSPATH signal transduction database: a knowledge base on signal transduction networks. Bioinform. 17(11): 1053-1057 (2001) - [j14]Edgar Wingender, Xin Chen, Ellen Fricke, R. Geffers, Reinhard Hehl, Ines Liebich, Mathias Krull, V. Matys, Holger Michael, R. Ohnhäuser, M. Prüß, Frank Schacherer, S. Thiele, S. Urbach:
The TRANSFAC system on gene expression regulation. Nucleic Acids Res. 29(1): 281-283 (2001) - [c28]Anatolij Potapov, Edgar Wingender:
Modeling the Architecture of Regulatory Networks. German Conference on Bioinformatics 2001: 6-10 - [c27]Alexander E. Kel, Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender:
ClusterScan: A Tool for Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters. German Conference on Bioinformatics 2001: 96-101 - [c26]Ellen Fricke, Sigrid Land, Stella Rotert, Dagmar Karas, Edgar Wingender:
Cytomer: A database on gene expression sources. German Conference on Bioinformatics 2001: 149-151 - [c25]Ellen Gößling, Olga V. Kel-Margoulis, Alexander E. Kel, Edgar Wingender:
MATCHTM - a tool for searching transcription factor binding sites in DNA sequences. Application for the analysis of human chromosomes. German Conference on Bioinformatics 2001: 158-161 - [c24]Ulrike Götze, Susanne Pistor, Claudia Choi, Mathias Krull, Frank Schacherer, Nico Voss, Edgar Wingender:
TRANSPATH - a database on signal transduction networks. German Conference on Bioinformatics 2001: 162-163 - [c23]Olga V. Kel-Margoulis, Igor Deineko, Ingmar Reuter, Edgar Wingender, Alexander E. Kel:
TRANSCompel® - a professional database on composite regulatory elements in eukaryotic genes. German Conference on Bioinformatics 2001: 185-187 - [c22]Dorothee-U. Kloos, Claudia Choi, Edgar Wingender:
The SMAD-TGF-beta SignallingNetwork: TRANSFAC meets TRANSPATH. German Conference on Bioinformatics 2001: 198-199 - [c21]Ines Liebich, Maik Christensen, Edgar Wingender:
ReAlSplice: A database on regulated alternative splicing. German Conference on Bioinformatics 2001: 206-207 - [c20]Holger Michael, S. Thiele, Edgar Wingender:
TRANSFAC®_YEAST. German Conference on Bioinformatics 2001: 208 - [c19]Anatolij Potapov, Klaus Seidl, Maik Christensen, Volker Drewes, Frank Schacherer, Edgar Wingender:
The integrated TRANSFAC system as a basis for modeling the architecture of gene regulatory networks. German Conference on Bioinformatics 2001: 218 - [c18]Klaus Seidl, Edgar Wingender:
-PheGe- a novel concept for in-silico analyses of genotype/phenotype relations. German Conference on Bioinformatics 2001: 226-227 - [e1]Edgar Wingender:
Computer science and biology: Proceedings of the German Conference on Bioinformatics, GCB 2001, October 7-10, 2001, Braunschweig, Germany. German Research Center for Biotechnology 2001, ISBN 3-00-008114-3 [contents] - 2000
- [j13]Edgar Wingender, Thomas Werner:
In Memory of Dan Prestridge. Silico Biol. 1: S29-S30 (2000) - [j12]Olga V. Kel-Margoulis, Aida G. Romashchenko, Nikolay A. Kolchanov, Edgar Wingender, Alexander E. Kel:
COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation. Nucleic Acids Res. 28(1): 311-315 (2000) - [j11]Edgar Wingender, Xin Chen, Reinhard Hehl, Holger Karas, Ines Liebich, V. Matys, T. Meinhardt, M. Prüß, Ingmar Reuter, Frank Schacherer:
TRANSFAC: an integrated system for gene expression regulation. Nucleic Acids Res. 28(1): 316-319 (2000) - [c17]Alexander E. Kel, Igor Deineko, Olga V. Kel-Margoulis, Edgar Wingender, Vadim Ratner:
Modeling of Gene Regulatory Network of Cell Cycle Control. Role of E2F Feedback Loops. German Conference on Bioinformatics 2000: 107-114
1990 – 1999
- 1999
- [j10]Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Anatoly S. Frolov, Elena A. Ananko, Fedor A. Kolpakov, Elena V. Ignatieva, Olga A. Podkolodnaya, T. N. Goryachkovskaya, Irina L. Stepanenko, Tatyana I. Merkulova, V. V. Babenko, Y. V. Ponomarenko, Alexey V. Kochetov, Nikolay L. Podkolodny, Denis G. Vorobiev, Sergey V. Lavryushev, Dmitry A. Grigorovich, Yury V. Kondrakhin, Luciano Milanesi, Edgar Wingender, Victor V. Solovyev, G. Christian Overton:
Integrated databases and computer systems for studying eukaryotic gene expression. Bioinform. 15(7): 669-686 (1999) - [j9]T. Heinemeyer, Xin Chen, Holger Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Ines Liebich, T. Meinhardt, Ingmar Reuter, Frank Schacherer, Edgar Wingender:
Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms. Nucleic Acids Res. 27(1): 318-322 (1999) - [c16]Alexander E. Kel, Olga V. Kel-Margoulis, Edgar Wingender:
E2F composite units in promoters of cell cycle genes. German Conference on Bioinformatics 1999: 148-154 - [c15]Xin Chen, Andreas W. M. Dress, Holger Karas, Ingmar Reuter, Edgar Wingender:
A database framework for mapping expression patterns. German Conference on Bioinformatics 1999: 174-178 - [c14]Xin Chen, Edgar Wingender:
CYTOMER® : A database on gene expression sources. German Conference on Bioinformatics 1999: 182-183 - [c13]Ines Liebich, Jürgen Bode, Edgar Wingender:
S/MARt DB: A database on chromatin organizing S/MAR regions. German Conference on Bioinformatics 1999: 210-212 - [c12]T. Meinhardt, M. Prüß, Edgar Wingender:
PathoDB - a database that combines pathological data with molecular information. German Conference on Bioinformatics 1999: 212-213 - [c11]Frank Schacherer, Edgar Wingender:
The Transpath Signal Transduction Database. German Conference on Bioinformatics 1999: 223-225 - 1998
- [j8]L. Pickert, Ingmar Reuter, Frank Klawonn, Edgar Wingender:
Transcription regulatory region analysis using signal detection and fuzzy clustering. Bioinform. 14(3): 244-251 (1998) - [j7]Edgar Wingender:
ISB: Just another journal? Silico Biol. 1(1): 1-4 (1998) - [j6]T. Heinemeyer, Edgar Wingender, Ingmar Reuter, Henning Hermjakob, Alexander E. Kel, Olga V. Kel-Margoulis, Elena V. Ignatieva, Elena A. Ananko, Olga A. Podkolodnaya, Fedor A. Kolpakov, Nikolay L. Podkolodny, Nikolay A. Kolchanov:
Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL. Nucleic Acids Res. 26(1): 362-367 (1998) - [c10]Alexander E. Kel, Olga V. Kel-Margoulis, Vladimir N. Babenko, Nikolay A. Kolchanov, Edgar Wingender:
Combinatorial identification of promoters induced upon immune cell activation. German Conference on Bioinformatics 1998 - [c9]Edgar Wingender, Xin Chen, T. Heinemeyer, Alexander E. Kel, Ines Liebich, T. Meinhardt:
A hierarchy of databases for modeling gene regulatory mechanisms. German Conference on Bioinformatics 1998 - [c8]Edgar Wingender:
Eine Hierarchie molekularbiologischer Datenbanken zur Beschreibung genregulatorischer Prozesse (Zusammenfassung). Workshop Data Mining und Data Warehousing 1998: 11 - [c7]Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Yury V. Kondrakhin, Anatoly S. Frolov, Fedor A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer:
GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. ISMB 1998: 95-104 - 1997
- [j5]Edgar Wingender, Alexander E. Kel, Olga V. Kel-Margoulis, Holger Karas, T. Heinemeyer, P. Dietze, Rainer Knüppel, Aida G. Romashchenko, Nikolay A. Kolchanov:
TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation. Nucleic Acids Res. 25(1): 265-268 (1997) - [c6]L. Pickert, Ingmar Reuter, Frank Klawonn, Edgar Wingender:
Transcription regulation regions revealed by Signal detection and fuzzy clusterfng. German Conference on Bioinformatics 1997: 99-101 - [c5]Mikhail P. Ponomarenko, Julia V. Ponomarenko, Alexander E. Kel, Nikolay A. Kolchanov, N. Karas, Edgar Wingender, Heinz Sklenar:
Identification of the significant conformational features of functional sites in B-DNA. German Conference on Bioinformatics 1997: 171 - 1996
- [j4]Holger Karas, Rainer Knüppel, Wolfgang Schulz, Heinz Sklenar, Edgar Wingender:
Combining structural analysis of DNA with search routines for the detection of transcription regulatory elements. Comput. Appl. Biosci. 12(5): 441-446 (1996) - [j3]Rainer Knüppel, Edgar Wingender:
Modellierung der Genregulation in Eukaryonten. Informationstechnik Tech. Inform. 38(5): 27-31 (1996) - [j2]Edgar Wingender, P. Dietze, Holger Karas, Rainer Knüppel:
TRANSFAC: a database on transcription factors and their DNA binding sites. Nucleic Acids Res. 24(1): 238-241 (1996) - [c4]Edgar Wingender, Holger Karas, P. Dietze, Rainer Knüppel, Heinz Sklenar:
Combined Approaches for the Detection of Regulatory Genomic Signals. German Conference on Bioinformatics 1996: 58-63 - [c3]Alexander E. Kel, O. V. Kel, Oleg V. Vishnevsky, Mikhail P. Ponomarenko, I. V. Ischenko, Holger Karas, Edgar Wingender, Nikolay A. Kolchanov, Heinz Sklenar:
TRRD and COMPEL Databases on Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences. German Conference on Bioinformatics - Selected Papers 1996: 99-105 - [c2]Alexander E. Kel, O. V. Kel, I. V. Ischenko, Nikolay A. Kolchanov, Holger Karas, Edgar Wingender, Heinz Sklenar:
TRRD and COMPEL Databases an Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences. German Conference on Bioinformatics 1996: 113-117 - 1995
- [c1]Alexander E. Kel, Yury V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov:
Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences. ISMB 1995: 197-205 - 1994
- [j1]Rainer Knüppel, P. Dietze, W. Lehnberg, Kornelie Frech, Edgar Wingender:
TRANSFAC Retrieval Program: A Network Model Database of Eukaryotic Transcription Regulating Sequences and Proteins. J. Comput. Biol. 1(3): 191-198 (1994)