- 2023
- Martin Wagner, Beat P. Müller-Stich, Anna Kisilenko, Duc Tran, Patrick Heger, Lars Mündermann, David M. Lubotsky, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Annika Reinke, Carissa Reid, Tong Yu, Armine Vardazaryan, Chinedu Innocent Nwoye, Nicolas Padoy, Xinyang Liu, Eung-Joo Lee, Constantin Disch, Hans Meine, Tong Xia, Fucang Jia, Satoshi Kondo, Wolfgang Reiter, Yueming Jin, Yonghao Long, Meirui Jiang, Qi Dou, Pheng-Ann Heng, Isabell Twick, Kadir Kirtaç, Enes Hosgor, Jon Lindström Bolmgren, Michael Stenzel, Björn von Siemens, Long Zhao, Zhenxiao Ge, Haiming Sun, Di Xie, Mengqi Guo, Daochang Liu, Hannes Götz Kenngott, Felix Nickel, Moritz von Frankenberg, Franziska Mathis-Ullrich, Annette Kopp-Schneider, Lena Maier-Hein, Stefanie Speidel, Sebastian Bodenstedt:
Comparative validation of machine learning algorithms for surgical workflow and skill analysis with the HeiChole benchmark. Medical Image Anal. 86: 102770 (2023) - Annika Reinke, Minu Tizabi, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Carole H. Sudre, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, Florian Büttner, M. Jorge Cardoso, Veronika Cheplygina, Jianxu Chen, Evangelia Christodoulou, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrian Galdran, Bram van Ginneken, Ben Glocker, Patrick Godau, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Fabian Isensee, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Jens Kleesiek, Florian Kofler, Thijs Kooi, Annette Kopp-Schneider, Michal Kozubek, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Susanne M. Rafelski, Nasir M. Rajpoot, Mauricio Reyes, Michael A. Riegler, Nicola Rieke, Julio Saez-Rodriguez, Clara I. Sánchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel A. Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Manuel Wiesenfarth, Ziv R. Yaniv, Paul F. Jäger, Lena Maier-Hein:
Understanding metric-related pitfalls in image analysis validation. CoRR abs/2302.01790 (2023) - 2022
- Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1477-1486 (2022) - Lucas-Raphael Müller, Jens Petersen, Amine Yamlahi, Philipp Wise, Tim J. Adler, Alexander Seitel, Karl-Friedrich Kowalewski, Beat Müller, Hannes Kenngott, Felix Nickel, Lena Maier-Hein:
Correction to: Robust hand tracking for surgical telestration. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1487 (2022) - Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Doreen Heckmann-Nötzel, Hannes Götz Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Tobias Roß, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Justin Collins, Ines Gockel, Jan Goedeke, Daniel A. Hashimoto, Luc Joyeux, Kyle Lam, Daniel Richard Leff, Amin Madani, Hani J. Marcus, Ozanan R. Meireles, Alexander Seitel, Dogu Teber, Frank Ückert, Beat P. Müller-Stich, Pierre Jannin, Stefanie Speidel:
Surgical data science - from concepts toward clinical translation. Medical Image Anal. 76: 102306 (2022) - Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim J. Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. Medical Image Anal. 80: 102488 (2022) - Lena Maier-Hein, Annika Reinke, Evangelia Christodoulou, Ben Glocker, Patrick Godau, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, A. Emre Kavur, Tim Rädsch, Minu Dietlinde Tizabi, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Peter Bankhead, Arriel Benis, M. Jorge Cardoso, Veronika Cheplygina, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Bram van Ginneken, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Alexandros Karargyris, Alan Karthikesalingam, Hannes Kenngott, Annette Kopp-Schneider, Anna Kreshuk, Tahsin M. Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus H. Maier-Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern H. Menze, David Moher, Karel G. M. Moons, Henning Müller, Felix Nickel, Brennan Nichyporuk, Jens Petersen, Nasir M. Rajpoot, Nicola Rieke, Julio Saez-Rodriguez, Clarisa Sánchez Gutiérrez, Shravya Shetty, Maarten van Smeden, Carole H. Sudre, Ronald M. Summers, Abdel A. Taha, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger:
Metrics reloaded: Pitfalls and recommendations for image analysis validation. CoRR abs/2206.01653 (2022) - 2021
- Tobias Roß, Annika Reinke, Peter M. Full, Martin Wagner, Hannes Kenngott, Martin Apitz, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Pablo Arbeláez, Gui-Bin Bian, Sebastian Bodenstedt, Jon Lindström Bolmgren, Laura Bravo Sánchez, Hua-Bin Chen, Cristina González, Dong Guo, Pål Halvorsen, Pheng-Ann Heng, Enes Hosgor, Zeng-Guang Hou, Fabian Isensee, Debesh Jha, Tingting Jiang, Yueming Jin, Kadir Kirtaç, Sabrina Kletz, Stefan Leger, Zhixuan Li, Klaus H. Maier-Hein, Zhen-Liang Ni, Michael A. Riegler, Klaus Schoeffmann, Ruohua Shi, Stefanie Speidel, Michael Stenzel, Isabell Twick, Guotai Wang, Jiacheng Wang, Liansheng Wang, Lu Wang, Yujie Zhang, Yan-Jie Zhou, Lei Zhu, Manuel Wiesenfarth, Annette Kopp-Schneider, Beat P. Müller-Stich, Lena Maier-Hein:
Comparative validation of multi-instance instrument segmentation in endoscopy: Results of the ROBUST-MIS 2019 challenge. Medical Image Anal. 70: 101920 (2021) - Gabriel Alexander Salg, Maria-Katharina Ganten, Andreas Michael Bucher, Hannes Götz Kenngott, Matthias A. Fink, Constantin Seibold, Ricarda Fischbach, Kai Schlamp, Carlos Alberto Velandia, Philipp Fervers, Felix Doellinger, Anna Luger, Saif Afat, Uta Merle, Markus K. Diener, Philippe L. Pereira, Tobias Penzkofer, Thorsten Persigehl, Ahmed Othman, Claus Peter Heußel, Matthias Baumhauer, Gerlig Widmann, Konstantinos Stathopoulos, Bernd Hamm, Thomas J. Vogl, Konstantin Nikolaou, Hans-Ulrich Kauczor, Jens Kleesiek:
A reporting and analysis framework for structured evaluation of COVID-19 clinical and imaging data. npj Digit. Medicine 4 (2021) - Oliver Klar, Maximilian Klass, Gerd Schneider, Hannes Kenngott, Oliver Heinze:
Estimation and Monitoring of Operating Room Utilization by a Distributed Streaming and Analytics Architecture Deployed at Heidelberg University Hospital's Medical Data Integration Center. MedInfo 2021: 345-349 - Martin Wagner, Beat Peter Müller-Stich, Anna Kisilenko, Duc Tran, Patrick Heger, Lars Mündermann, David M. Lubotsky, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Annika Reinke, Tong Yu, Armine Vardazaryan, Chinedu Innocent Nwoye, Nicolas Padoy, Xinyang Liu, Eung-Joo Lee, Constantin Disch, Hans Meine, Tong Xia, Fucang Jia, Satoshi Kondo, Wolfgang Reiter, Yueming Jin, Yonghao Long, Meirui Jiang, Qi Dou, Pheng-Ann Heng, Isabell Twick, Kadir Kirtaç, Enes Hosgor, Jon Lindström Bolmgren, Michael Stenzel, Björn von Siemens, Hannes Götz Kenngott, Felix Nickel, Moritz von Frankenberg, Franziska Mathis-Ullrich, Lena Maier-Hein, Stefanie Speidel, Sebastian Bodenstedt:
Comparative Validation of Machine Learning Algorithms for Surgical Workflow and Skill Analysis with the HeiChole Benchmark. CoRR abs/2109.14956 (2021) - Silvia Seidlitz, Jan Sellner, Jan Odenthal, Berkin Özdemir, Alexander Studier-Fischer, Samuel Knödler, Leonardo Ayala, Tim Adler, Hannes Götz Kenngott, Minu Tizabi, Martin Wagner, Felix Nickel, Beat P. Müller-Stich, Lena Maier-Hein:
Robust deep learning-based semantic organ segmentation in hyperspectral images. CoRR abs/2111.05408 (2021) - 2020
- Tobias Roß, Annika Reinke, Peter M. Full, Martin Wagner, Hannes Kenngott, Martin Apitz, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Pablo Arbeláez, Gui-Bin Bian, Sebastian Bodenstedt, Jon Lindström Bolmgren, Laura Bravo Sánchez, Hua-Bin Chen, Cristina González, Dong Guo, Pål Halvorsen, Pheng-Ann Heng, Enes Hosgor, Zeng-Guang Hou, Fabian Isensee, Debesh Jha, Tingting Jiang, Yueming Jin, Kadir Kirtaç, Sabrina Kletz, Stefan Leger, Zhixuan Li, Klaus H. Maier-Hein, Zhen-Liang Ni, Michael A. Riegler, Klaus Schoeffmann, Ruohua Shi, Stefanie Speidel, Michael Stenzel, Isabell Twick, Guotai Wang, Jiacheng Wang, Liansheng Wang, Lu Wang, Yujie Zhang, Yan-Jie Zhou, Lei Zhu, Manuel Wiesenfarth, Annette Kopp-Schneider, Beat Peter Müller-Stich, Lena Maier-Hein:
Robust Medical Instrument Segmentation Challenge 2019. CoRR abs/2003.10299 (2020) - Lena Maier-Hein, Martin Wagner, Tobias Roß, Annika Reinke, Sebastian Bodenstedt, Peter M. Full, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Anna Kisilenko, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Minu Tizabi, Matthias Eisenmann, Tim J. Adler, Janek Gröhl, Melanie Schellenberg, Silvia Seidlitz, T. Y. Emmy Lai, Veith Roethlingshoefer, Fabian Both, Sebastian Bittel, Marc Mengler, Martin Apitz, Stefanie Speidel, Hannes Götz Kenngott, Beat P. Müller-Stich:
Heidelberg Colorectal Data Set for Surgical Data Science in the Sensor Operating Room. CoRR abs/2005.03501 (2020) - Lena Maier-Hein, Matthias Eisenmann, Duygu Sarikaya, Keno März, Toby Collins, Anand Malpani, Johannes Fallert, Hubertus Feussner, Stamatia Giannarou, Pietro Mascagni, Hirenkumar Nakawala, Adrian Park, Carla M. Pugh, Danail Stoyanov, S. Swaroop Vedula, Beat Peter Müller-Stich, Kevin Cleary, Gabor Fichtinger, Germain Forestier, Bernard Gibaud, Teodor P. Grantcharov, Makoto Hashizume, Hannes Kenngott, Ron Kikinis, Lars Mündermann, Nassir Navab, Sinan Onogur, Raphael Sznitman, Russell H. Taylor, Minu Dietlinde Tizabi, Martin Wagner, Gregory D. Hager, Thomas Neumuth, Nicolas Padoy, Pierre Jannin, Stefanie Speidel:
Surgical Data Science - from Concepts to Clinical Translation. CoRR abs/2011.02284 (2020) - 2019
- Sebastian Bodenstedt, Martin Wagner, Lars Mündermann, Hannes Kenngott, Beat P. Müller-Stich, Michael Breucha, Sören Torge Mees, Jürgen Weitz, Stefanie Speidel:
Prediction of laparoscopic procedure duration using unlabeled, multimodal sensor data. Int. J. Comput. Assist. Radiol. Surg. 14(6): 1089-1095 (2019) - Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of Distribution Detection for Intra-operative Functional Imaging. UNSURE/CLIP@MICCAI 2019: 75-82 - Tim J. Adler, Leonardo Ayala, Lynton Ardizzone, Hannes Kenngott, Anant Suraj Vemuri, Beat P. Müller-Stich, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Out of distribution detection for intra-operative functional imaging. CoRR abs/1911.01877 (2019) - 2018
- Bernard Gibaud, Germain Forestier, Carolin Feldmann, Giancarlo Ferrigno, Paulo J. S. Gonçalves, Tamás Haidegger, Chantal Julliard, Darko Katic, Hannes Kenngott, Lena Maier-Hein, Keno März, Elena De Momi, Dénes Ákos Nagy, Hirenkumar Nakawala, Juliane Neumann, Thomas Neumuth, Javier Rojas Balderrama, Stefanie Speidel, Martin Wagner, Pierre Jannin:
Toward a standard ontology of surgical process models. Int. J. Comput. Assist. Radiol. Surg. 13(9): 1397-1408 (2018) - Micha Pfeiffer, Hannes Kenngott, Anas Preukschas, Matthias Huber, Lisa Bettscheider, Beat P. Müller-Stich, Stefanie Speidel:
IMHOTEP: virtual reality framework for surgical applications. Int. J. Comput. Assist. Radiol. Surg. 13(5): 741-748 (2018) - Tobias Roß, David Zimmerer, Anant Suraj Vemuri, Fabian Isensee, Manuel Wiesenfarth, Sebastian Bodenstedt, Fabian Both, Philip Kessler, Martin Wagner, Beat Müller, Hannes Kenngott, Stefanie Speidel, Annette Kopp-Schneider, Klaus H. Maier-Hein, Lena Maier-Hein:
Exploiting the potential of unlabeled endoscopic video data with self-supervised learning. Int. J. Comput. Assist. Radiol. Surg. 13(6): 925-933 (2018) - Sara Moccia, Sebastian J. Wirkert, Hannes Kenngott, Anant Suraj Vemuri, Martin Apitz, Benjamin F. B. Mayer, Elena De Momi, Leonardo S. Mattos, Lena Maier-Hein:
Uncertainty-Aware Organ Classification for Surgical Data Science Applications in Laparoscopy. IEEE Trans. Biomed. Eng. 65(11): 2649-2659 (2018) - Sebastian J. Wirkert, Anant Suraj Vemuri, Hannes Götz Kenngott, Sara Moccia, Michael Götz, Benjamin F. B. Mayer, Klaus Hermann Maier-Hein, Daniel S. Elson, Lena Maier-Hein:
Abstract: Physiological Parameter Estimation from Multispectral Images Unleashed. Bildverarbeitung für die Medizin 2018: 36 - Micha Pfeiffer, Hannes Kenngott, Anas Preukschas, Matthias Huber, Lisa Bettscheider, Beat P. Müller-Stich, Stefanie Speidel:
IMHOTEP - Virtual Reality Framework for Surgical Applications. CoRR abs/1803.08264 (2018) - Sebastian Bodenstedt, Max Allan, Anthony Agustinos, Xiaofei Du, Luis C. García-Peraza-Herrera, Hannes Kenngott, Thomas Kurmann, Beat P. Müller-Stich, Sébastien Ourselin, Daniil Pakhomov, Raphael Sznitman, Marvin Teichmann, Martin Thoma, Tom Vercauteren, Sandrine Voros, Martin Wagner, Pamela Wochner, Lena Maier-Hein, Danail Stoyanov, Stefanie Speidel:
Comparative evaluation of instrument segmentation and tracking methods in minimally invasive surgery. CoRR abs/1805.02475 (2018) - Lena Maier-Hein, Matthias Eisenmann, Carolin Feldmann, Hubertus Feussner, Germain Forestier, Stamatia Giannarou, Bernard Gibaud, Gregory D. Hager, Makoto Hashizume, Darko Katic, Hannes Kenngott, Ron Kikinis, Michael Kranzfelder, Anand Malpani, Keno März, Beat P. Müller-Stich, Nassir Navab, Thomas Neumuth, Nicolas Padoy, Adrian Park, Carla M. Pugh, Nicolai Schoch, Danail Stoyanov, Russell H. Taylor, Martin Wagner, S. Swaroop Vedula, Pierre Jannin, Stefanie Speidel:
Surgical Data Science: A Consensus Perspective. CoRR abs/1806.03184 (2018) - Sebastian Bodenstedt, Antonia Ohnemus, Darko Katic, Anna-Laura Wekerle, Martin Wagner, Hannes Kenngott, Beat P. Müller-Stich, Rüdiger Dillmann, Stefanie Speidel:
Real-time image-based instrument classification for laparoscopic surgery. CoRR abs/1808.00178 (2018) - Sebastian Bodenstedt, Martin Wagner, Lars Mündermann, Hannes Kenngott, Beat P. Müller-Stich, Sören Torge Mees, Jürgen Weitz, Stefanie Speidel:
Prediction of laparoscopic procedure duration using unlabeled, multimodal sensor data. CoRR abs/1811.03384 (2018) - 2017
- Daniel Reichard, Dominik Häntsch, Sebastian Bodenstedt, Stefan Suwelack, Martin Wagner, Hannes Kenngott, Beat Peter Müller-Stich, Lena Maier-Hein, Rüdiger Dillmann, Stefanie Speidel:
Projective biomechanical depth matching for soft tissue registration in laparoscopic surgery. Int. J. Comput. Assist. Radiol. Surg. 12(7): 1101-1110 (2017) - Norman Spangenberg, Christoph Augenstein, Bogdan Franczyk, Martin Wagner, Martin Apitz, Hannes Kenngott:
Method for Intra-Surgical Phase Detection by Using Real-Time Medical Device Data. CBMS 2017: 254-259